iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108942

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377687

Gene Name

SELMODRAFT_2432

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_2432	EFJ07226	EFJ07226

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.30e-82	276.2	1	321

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeel...........w...kskkkavsprellkalkkeaeefsgye 88
           Gl NlgNtC++NSv+Q L++++ l++++l+     ++      ++g+l+++l+++f e+               +++ + ++p+ l+ al++++++fsgy+
   Q: 1    GLVNLGNTCFFNSVMQNLLAVRYLKDYFLN----PVAG---GASEGPLTSALRRFFLEIngdnleafsgnAkkrHRDYTTYNPKGLFGALCSKSSRFSGYH 94
           9*****************************....4444...45789*************666666655541445777779********************* PP
   S: 89   qqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqd 189
           qqD++E+l++lld+l+ e k+               + s+e+++ + k+ ++++++lF+gq+ s+++c ec+++ss  epfld+slp+p  + +   sl+ 
   Q: 95   QQDSHELLRCLLDGLQVEGKH---------------KESEEKNSTNGKEDHTFVDHLFGGQFASTVTCCECGHSSSVLEPFLDVSLPIPFITAK---SLEG 177
           *****************9922...............23334556789999***************************************99987...**** PP
   S: 190  cLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGsl 290
           cL++ftk e l gen++ c++c++ ++a+k+l ++k P+vL++hLkRf  +  +++ +k++ +v f + L+lspf++ + +       Y+L++vv HsG++
   Q: 178  CLQAFTKLEVLSGENAWGCDNCTR-RKATKRLVIRKAPPVLTVHLKRFAQD-MRGRLSKLTGHVAFDELLNLSPFLSASRD----GGLYRLVGVVEHSGTM 272
           **********************96.55*********************555.569999*********99********9554....68************** PP
   S: 291  ssGHYvayvkn......ekgk..WllfdDskVtevkeeevleetgstaYvlfYk 336
           ++GHYva+v+       +  +  W++++Ds V+ ++ ++vl+   s+aY+lfY+
   Q: 273  KGGHYVAFVRGgsagdgK--EnfWYYISDSDVRRTTLDQVLR---SEAYLLFYE 321
           ***********6665433..156*******************...********7 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

GLVNLGNTCF FNSVMQNLLA VRYLKDYFLN PVAGGASEGP LTSALRRFFL EINGDNLEAF 60
SGNAKKRHRD YTTYNPKGLF GALCSKSSRF SGYHQQDSHE LLRCLLDGLQ VEGKHKESEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCTCGTCA ACTTGGGGAA TACGTGCTTC TTCAACTCGG TCATGCAAAA CTTGCTCGCG 60
GTGAGGTACT TGAAGGACTA CTTTCTCAAT CCTGTCGCTG GTGGTGCTTC CGAGGGACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_2432

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003015	Amborella trichopoda	58.91	6.00e-40	159.00
IUUC-Aly-005494	Arabidopsis lyrata	49.11	5.00e-41	162.00
IUUC-Ath-007211	Arabidopsis thaliana	57.03	1.00e-39	157.00
IUUC-Bol-015853	Brassica oleracea	60.00	8.00e-42	164.00
IUUC-Bra-017085	Brassica rapa	59.52	6.00e-42	162.00
IUUC-Ete-032627	Echinops telfairi	32.63	5.00e-29	122.00
IUUC-Lch-050527	Latimeria chalumnae	38.55	3.00e-48	185.00
IUUC-Ppa-095825	Physcomitrella patens	48.22	2.00e-44	174.00
IUUC-Pop-099588	Populus trichocarpa	56.15	3.00e-39	156.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence