iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-100089

Ensembl Protein ID

POPTR_0002s04550.1

UniProt Accession

U5GS57; U5GS57_POPTR

Genbank Protein ID

ERP64042.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTR_0002s04550g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s04550	POPTR_0002s04550.1	POPTR_0002s04550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-09	37.8	264	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           + v++laf +d   l+s ++Dg ++ WDlrt  +++
   Q: 264  GTVRSLAFaDDgQQLLSHGGDGHVYHWDLRTRACIH 299
           689******88899***999**********988875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

KKLENFLFGS LYSPVQFGKG EEENNSLSFF LDRSMGGVGP DSQEDVELTE DSDIEEENKQ 60
RKLPGLTRKD VDESLISGTR YVARLRAQHA KMNPDTDWAR LDSQSRNDGL SDEENGTVLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAAGTTGG AGAACTTTTT GTTTGGTTCT CTATACTCTC CTGTTCAATT TGGGAAAGGA 60
GAAGAAGAAA ATAATTCTCT TTCATTCTTT TTGGACCGGT CTATGGGTGG TGTAGGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

pop:POPTR_0002s04550g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence