iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099624

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_551449; POPTR_0002s08360g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s08360	POPTR_0002s08360.1	POPTR_0002s08360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.80e-09	37.4	167	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle+f   ++ +++lpCgH+fh dC+ +w        ++ +CPlCr
   Q: 167  CMVCLEEFlmgSE-VVCLPCGHIFHGDCIVRW------LETSHLCPLCR 208
           9*******99666.888***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRQDFSTNVD SNNSTAPTTD AIIIHLQFSH VLELCYPETI QIPLNTTNES HLFPRQLFSS 60
HVNRESIVKE ILSSMGCSSD FIESAAPDIS SFALDMVTNP CNASSSEVLT MVLAIHVTTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCCAAG ATTTCAGCAC CAACGTTGAC AGCAACAATT CCACAGCCCC AACCACCGAT 60
GCAATCATCA TCCACTTACA ATTCAGCCAT GTTCTTGAAC TATGTTACCC CGAAACCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s08360g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005743	Arabidopsis lyrata	49.30	2.00e-17	82.80
IUUC-Ath-007537	Arabidopsis thaliana	46.48	1.00e-16	79.00
IUUC-Bol-015892	Brassica oleracea	51.35	2.00e-15	75.10
IUUC-Bra-017504	Brassica rapa	51.35	4.00e-19	87.40
IUUC-Ete-032670	Echinops telfairi	55.56	8.00e-11	61.60
IUUC-Fal-036861	Ficedula albicollis	54.35	4.00e-11	63.20
IUUC-Pma-094186	Petromyzon marinus	43.90	2.00e-12	67.00
IUUC-Ppe-101145	Prunus persica	42.18	5.00e-45	173.00
IUUC-Stu-112667	Solanum tuberosum	56.52	2.00e-19	85.90
IUUC-Sar-113147	Sorex araneus	55.56	5.00e-10	58.90
IUUC-Tgu-117258	Taeniopygia guttata	54.35	6.00e-11	62.00
IUUC-Tsy-119127	Tarsius syrichta	55.56	5.00e-10	58.90
IUUC-Tca-121090	Theobroma cacao	49.41	7.00e-22	97.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence