iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098849

Ensembl Protein ID

POPTR_0002s12650.1

UniProt Accession

B9GNV0; B9GNV0_POPTR

Genbank Protein ID

EEE80450.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_551844; POPTR_0002s12650g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s12650	POPTR_0002s12650.1	POPTR_0002s12650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-07	30.6	12	42

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H   vtcl f  +d llvsGs D +++vW+l
   Q: 12   HYRTVTCLVFteDDSLLVSGSEDVSVRVWSL 42
           7778******97779********99****96 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTGRLLKKWR AHYRTVTCLV FTEDDSLLVS GSEDVSVRVW SLLVIFDDYQ TERASTLYEH 60
SFQEHTLRVT DMVGSLSNRI LLRNIQFPSI IDAITLDPDE HVFYAGGRDG KIHIAALNAD 120

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Nucleotide Sequence
(Fasta)

AGCTTCAGGA CCCCAAAGCA TCTTCAGGCT CCATCCTCTA CTGGTCCTGG TCTAAGGTAT 60
ATGCACTTGA AGTGTTTGAT TAAATTCATC TAAGTATGTT TGGTCTGATA TATTTCATTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0002s12650g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence