iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017550

Ensembl Protein ID

Bra003404.1-P

UniProt Accession

M4CGS1; M4CGS1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003404	Bra003404.1	Bra003404.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.9	107	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d++++lp C H+fhadC+  w         +++CPlCr
   Q: 107  CAVCLSRFepDDQLRLLPlCCHAFHADCIDIW------LVSNQTCPLCR 149
           ********99788*******************......999*******8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MESLIDPSHG DSHSSSLDSL KPSVLVIILI LLMTLLISVS ICFLLRCLNR CSSHHSSLSP 60
SSSTESLRFS NRRVSPETER SSVLDSLPVF KFSSVTRRSS ASNSSDCAVC LSRFEPDDQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTCTC TCATCGACCC TAGCCATGGC GATTCTCACT CTTCATCTCT CGACAGTCTC 60
AAACCTAGTG TCTTAGTCAT CATCCTCATC CTCCTCATGA CTCTCCTCAT CTCCGTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005918	Arabidopsis lyrata	71.52	4.00e-91	327.00
IUUC-Ath-007239	Arabidopsis thaliana	73.78	1.00e-93	335.00
IUUC-Bdi-014533	Brachypodium distachyon	39.02	6.00e-25	107.00
IUUC-Bol-015819	Brassica oleracea	90.24	6.00e-114	403.00
IUUC-Lpe-050711	Leersia perrieri	36.36	4.00e-18	85.10
IUUC-Mtr-058394	Medicago truncatula	50.56	5.00e-54	204.00
IUUC-Mac-065570	Musa acuminata	46.34	8.00e-20	90.90
IUUC-Oba-075944	Oryza barthii	34.62	1.00e-22	99.40
IUUC-Obr-076640	Oryza brachyantha	33.17	5.00e-21	94.70
IUUC-Ogl-077705	Oryza glaberrima	35.92	4.00e-20	92.00
IUUC-Ogu-078864	Oryza glumaepatula	36.59	4.00e-21	95.10
IUUC-Oin-079511	Oryza indica	35.12	2.00e-20	92.00
IUUC-Ome-081312	Oryza meridionalis	35.89	1.00e-19	90.50
IUUC-Oni-082796	Oryza nivara	35.92	4.00e-20	92.00
IUUC-Opu-083307	Oryza punctata	38.93	1.00e-21	97.10
IUUC-Oru-084702	Oryza rufipogon	35.92	4.00e-20	92.00
IUUC-Osa-085669	Oryza sativa	33.49	4.00e-24	105.00
IUUC-Pop-100094	Populus trichocarpa	51.84	4.00e-49	187.00
IUUC-Ppe-101209	Prunus persica	50.65	7.00e-51	193.00
IUUC-Sit-110129	Setaria italica	33.18	3.00e-19	89.00
IUUC-Sly-111858	Solanum lycopersicum	43.01	1.00e-40	160.00
IUUC-Stu-112105	Solanum tuberosum	44.94	5.00e-42	164.00
IUUC-Sbi-114578	Sorghum bicolor	39.74	1.00e-19	90.50
IUUC-Tca-120922	Theobroma cacao	59.63	2.00e-59	222.00
IUUC-Tae-124222	Triticum aestivum	35.78	3.00e-23	102.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence