iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007470

UUCD1 version

UUC-ArT-00677

Ensembl Protein ID

AT3G61180.1

UniProt Accession

Q93YQ5; Q93YQ5_ARATH

Genbank Protein ID

AAL24312.1; AAL47351.1; AEE80168.1

Protein Name

Putative uncharacterized protein At3g61180; T20K12.80; RING/U-box superfamily protein

Genbank Nucleotide ID

AY059830; AY064638; CP002686

Gene Name

T20K12.80; At3g61180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G61180	AT3G61180.1	AT3G61180.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-07	31.3	323	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ ++dg  ++ lpC H+fh  C+ kw       + +++CPlC+
   Q: 323  CSICLCAYEDGveLRELPCRHHFHSLCVDKW------LRINATCPLCK 364
           ********9994455699*************......**********7 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MNQSIPSTVS SSPTTDTMDA SPLLGRNRRN RPRSSQPIRG AASRLLRRAS NRRMMLREPS 60
VRVREVAAEQ LEERQSQWAY SKPIIVLDIL WNFLFVIVSI AILGFSSDED PDVPLRLWII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATATCAAAA CGTTTATTGG GGACAAGACA TTCTCTTGTC GTTTTGTCAA TTATCCATTA 60
GATAGAAACT GGTCCTCGAA ACCTAGAATC ATCCACCCCG CAAAGTCGAC AGATTTCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005774--C:vacuolar membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G61180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005930	Arabidopsis lyrata	95.25	2.00e-179	620.00
IUUC-Bol-015878	Brassica oleracea	83.54	1.00e-148	518.00
IUUC-Bra-017312	Brassica rapa	83.98	6.00e-151	526.00
IUUC-Pop-099020	Populus trichocarpa	57.03	9.00e-103	366.00
IUUC-Ppe-101951	Prunus persica	63.50	1.00e-108	385.00
IUUC-Tca-121200	Theobroma cacao	65.23	6.00e-121	426.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence