iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099743

Ensembl Protein ID

POPTR_0003s02410.2

UniProt Accession

U5GP80; U5GP80_POPTR

Genbank Protein ID

ERP63076.1; ERP63077.1; ERP63078.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339; CM000339; CM000339

Gene Name

POPTR_0003s02410g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s02410	POPTR_0003s02410.2	POPTR_0003s02410.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-08	34.6	192	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ ++t+laf +    lvs++ D ++ vW+
   Q: 192  GHSKRITGLAFsHVlSVLVSSGADAQLCVWN 222
           8**********6224579************9 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKFDRMPRTV KMTKNSRYVQ YIVHGDGIVF YHYASKRALL NGIDSISRLI YTNSGNAILA 60
LASNAIHLLW KWQRSDRNAS GKATAGVPPQ LWQPSSGILM TNDITDSNPE EAVACFALSK 120

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Nucleotide Sequence
(Fasta)

ATGAAGTTTG ACCGCATGCC ACGTACAGTT AAGATGACAA AGTAATTTGA GTAAAAATGT 60
TTTGAAATAC TAATAGAGGA AAGCAACATA TTAGGGCTTT TAGAAGACGC TTGTGTCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

pop:POPTR_0003s02410g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence