iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095398

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545284

Gene Name

PHYPADRAFT_227141

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S399_20V6	PP1S399_20V6.1	PP1S399_20V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-08	35.0	336	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  ++ lpC H+fh +C+ kw       + +++CPlC+
   Q: 336  CCICLSSYEDGveLRHLPCSHHFHSTCISKW------LRINATCPLCK 377
           ********999555569**************......**********7 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDRDRSRVSF SSSTTESDSI AAPLIPNRNG SSSSGSGSEG GSQRGSRSRV QGAARFLRRA 60
GSRRLMREPS MLVRESAAEQ LEVRQSDWAY SKPVVVLDLI WNLAFVLLSL AVLVLSRKEK 120

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Nucleotide Sequence
(Fasta)

AAGGTGTTTG CAATTTCGAG GAGCGCCGAG AAGGAGGAGG TGTGGCGTTC AGGGGATCCG 60
TCGTCGTGGC TCCAGACGGC GCTGGCAGCG TGTGTGTGGC CGAATTGGTC GACAAAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_227141

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015152	Brassica oleracea	59.25	5.00e-88	317.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence