iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110912

Ensembl Protein ID

Solyc01g050040.2.1

UniProt Accession

K4AVI1; K4AVI1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g050040.2	Solyc01g050040.2.1	Solyc01g050040.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-06	28.3	90	131

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cledf   ++ + +pC H fh  C+  w         + +CP+Cr
   Q: 90   CSVCLEDFeiGTEAKEMPCRHKFHGGCILPW------LELHSTCPVCR 131
           ********77333778***************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MKTGTQVESR DRERVILINP FNQTIIVQGS DNNSRNQPIG SLGDYFIGPG LDVLLQHLAE 60
NDPNRYGTPP AQKEVVEALP VVTIDETLQC SVCLEDFEIG TEAKEMPCRH KFHGGCILPW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGTTGAGT TAAAATGTCC CATTTGTCAA CTAGGATTTA TTGAAGAAAT GGGTTCAGAC 60
GATAATCAGA CCCTTTTAGA TTCTGATTCT GATCCTGATC ATGCTCTCTC ACTTTGGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000247	Aegilops tauschii	47.76	3.00e-41	162.00
IUUC-Atr-003093	Amborella trichopoda	56.35	3.00e-52	197.00
IUUC-Aly-006367	Arabidopsis lyrata	61.14	1.00e-63	236.00
IUUC-Ath-006738	Arabidopsis thaliana	59.78	1.00e-56	212.00
IUUC-Bdi-014762	Brachypodium distachyon	52.38	4.00e-33	134.00
IUUC-Bol-016131	Brassica oleracea	60.22	7.00e-54	203.00
IUUC-Bra-016653	Brassica rapa	57.73	5.00e-55	207.00
IUUC-Csv-025892	Ciona savignyi	42.20	2.00e-19	87.40
IUUC-Gga-040282	Gallus gallus	45.79	2.00e-22	97.40
IUUC-Gma-044146	Glycine max	61.54	8.00e-58	216.00
IUUC-Hvu-047357	Hordeum vulgare	47.98	1.00e-40	159.00
IUUC-Itr-048142	Ictidomys tridecemlineatus	42.50	4.00e-22	97.80
IUUC-Lpe-051411	Leersia perrieri	64.29	4.00e-45	174.00
IUUC-Mtr-058295	Medicago truncatula	62.84	1.00e-62	232.00
IUUC-Mac-065169	Musa acuminata	53.07	3.00e-42	164.00
IUUC-Oba-075441	Oryza barthii	55.56	4.00e-45	174.00
IUUC-Obr-076715	Oryza brachyantha	61.08	9.00e-49	186.00
IUUC-Ogl-077359	Oryza glaberrima	55.56	4.00e-45	174.00
IUUC-Ogu-078243	Oryza glumaepatula	54.94	1.00e-44	172.00
IUUC-Oin-079349	Oryza indica	56.17	8.00e-46	176.00
IUUC-Olo-080400	Oryza longistaminata	55.76	5.00e-46	177.00
IUUC-Ome-081311	Oryza meridionalis	57.41	8.00e-47	180.00
IUUC-Oni-082403	Oryza nivara	54.94	2.00e-44	172.00
IUUC-Opu-084151	Oryza punctata	47.21	7.00e-38	150.00
IUUC-Oru-085092	Oryza rufipogon	55.56	6.00e-45	174.00
IUUC-Osa-085947	Oryza sativa	56.17	8.00e-46	176.00
IUUC-Pop-099555	Populus trichocarpa	78.36	1.00e-59	223.00
IUUC-Ppe-101941	Prunus persica	78.91	5.00e-57	214.00
IUUC-Sit-110378	Setaria italica	37.91	1.00e-28	119.00
IUUC-Stu-112771	Solanum tuberosum	92.90	2.00e-97	348.00
IUUC-Sbi-114729	Sorghum bicolor	56.00	6.00e-48	183.00
IUUC-Tca-121112	Theobroma cacao	60.56	3.00e-56	211.00
IUUC-Tae-123401	Triticum aestivum	39.83	6.00e-35	140.00
IUUC-Tur-126272	Triticum urartu	57.83	4.00e-48	184.00
IUUC-Vvi-131512	Vitis vinifera	75.76	6.00e-57	213.00
IUUC-Zma-135106	Zea mays	63.19	5.00e-46	177.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence