iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098788

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTR_0004s00430g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s00430	POPTR_0004s00430.1	POPTR_0004s00430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-08	35.9	50	107
E3 adaptor/Cullin RING/DCX/DWD	5.00e-18	65.6	278	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrr 63
           + lCpI +++ +d   +++G+++   +I  +l++++  cP +++ lt++ + Pn  l +
   Q: 50   DILCPICMQIIKDAFLTSCGHSFCYLCITTHLRNKND-CPCCSHYLTNNHIFPNFLLNK 107
           679*********************************9.****************88755 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           gH   v+ ++f s++ l+s+s D t+++WD++++  l
   Q: 278  GHRKAVSYVKFlSSNELASASTDSTLRLWDVKDNLAL 314
           79999******9779****************987665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MITSLTHTHH TQKKQTNMGG ESSMGALVPS VNSEATTSKM QPPTEELDKD ILCPICMQII 60
KDAFLTSCGH SFCYLCITTH LRNKNDCPCC SHYLTNNHIF PNFLLNKIQT DLQYIKEDIN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCACAT CACTCACTCA CACCCACCAC ACACAAAAAA AACAAACAAA CATGGGTGGA 60
GAGAGCTCTA TGGGGGCACT TGTCCCCTCT GTGAATTCTG AGGCAACAAC CTCCAAAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0004s00430g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Sce-106454	Saccharomyces cerevisiae	39.47	2.00e-10	60.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence