iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099522

Ensembl Protein ID

POPTR_0004s03460.1

UniProt Accession

U5GHN1; U5GHN1_POPTR

Genbank Protein ID

ERP61801.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTR_0004s03460g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s03460	POPTR_0004s03460.1	POPTR_0004s03460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-11	45.0	173	209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGs.dDgtikvWDlrtgv 34
           g+++++t ++f  d ++l +G+  D  i +WD+r+ v
   Q: 173  GQEGGITHVQFsKDgNYLYTGGrKDPYILCWDVRKAV 209
           57889*******777*****99899********9876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVVAVMLMDS YDANLVVKEG ESVYDFCWYP YTTASDPVSC VFATTTLDHP IHLLDSTSGL 60
VLVYLFVWVS ALTYRAYDAV DEITAAISLA FNPAGTKIFA GYNKSIRIFD IHRPGRDFAQ 120

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Nucleotide Sequence
(Fasta)

ATGGTAGTGG CTGTGATGCT GATGGGTGTT GTTTACCTAC TGATGAAGGT GAGTTCTTTA 60
GTTTAGACTT AGAAAACGAT CATATTTTAA AGGAAATATC GAATGCCCAC CTTTTTTTCC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0004s03460g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence