iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098916

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_746093; POPTR_0004s11340g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s11340	POPTR_0004s11340.1	POPTR_0004s11340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.40e-08	33.9	177	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplv.lpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl+++  ++ p++ + C H+fh+ C++ w        ++++CP+C
   Q: 177  CPTCLDEYtqEN-PKImTKCTHHFHLGCIYEW------MERSDSCPVC 217
           ********7555.655277*************......********** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSVCCCLHA DDFEDYMNPE NSVYRNCMCL GCFVQNFLHV YTSIFQRGQL HSVPSSIQGA 60
ASLTSSSSLD NSLADMYQSP PRPLPYDADP RCIRFQRDGL VSRRDKGSSH SHEESEPLRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGACACTGCT TTAATTCCGC GCTTTCGTAG CTTTTCTCGC CGAAGCATTA ACTAAAACAG 60
ATAACCCAAA TATCCTCTCT TGTTTCTTCT CCTCGACTTG TCCCAGCTCT TACAAGGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0004s11340g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence