iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098887

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_556410; POPTR_0004s11880g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s11880	POPTR_0004s11880.1	POPTR_0004s11880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-07	32.0	42	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H+++++++++   +  +l+s+ +Dg++++WDlrt 
   Q: 42   HNSWISACKWhtKSlFHLLSAFYDGKVMLWDLRTA 76
           9*********86445679**************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIILNAVYCQ RLLQPREGDL VSIKKRKVKS NAEESQLEFS SHNSWISACK WHTKSLFHLL 60
SAFYDGKVML WDLRTAWPLV IIDSHEDKVL CADWWKGDSV ISGGVDSKLC ISSGISVQ 118

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Nucleotide Sequence
(Fasta)

ATGATCATTT TAAATGCAGT ATACTGTCAA AGACTGCTTC AGCCTAGAGG TACAAGTGCA 60
AGATGTTTTA CTGGAATTAT GACTCATCTG GCTTGAATCC TCTATATCAG TGATGACATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0000460--P:maturation of 5.8S rRNA
GO:0000470--P:maturation of LSU-rRNA

KEGG

pop:POPTR_0004s11880g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence