iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112159

Ensembl Protein ID

PGSC0003DMT400063786

UniProt Accession

M1CB87; M1CB87_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400024794	PGSC0003DMT400063786	PGSC0003DMT400063786

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.5	83	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f+++  ++ lp C+Hvfh dC++kw     +++ +f+CPlCr
   Q: 83   CSICLVEFEKEhvVCQLPrCNHVFHMDCIEKW-----LKRCQFTCPLCR 126
           ********77655777889*************.....8999*******8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MISFMHDSSH VSTITIIFCT CVYIPFLQLK HTIREIAKFI RVHLYLQPCK DDLLEDNSNC 60
RLNLPASRFL DLDMSSSCID ETCSICLVEF EKEHVVCQLP RCNHVFHMDC IEKWLKRCQF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTCTTTA TTCTTTCTCA TCTTTCTGTA TCTATTATTA TTACCAGTCA AAACCTGAAG 60
AAACAAAATG ATCAGTTTTA TGCACGATTC ATCCCATGTT TCTACTATAA CCATAATCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006032	Arabidopsis lyrata	36.17	8.00e-17	78.20
IUUC-Ath-006708	Arabidopsis thaliana	37.50	5.00e-17	79.00
IUUC-Bol-016104	Brassica oleracea	37.04	1.00e-17	83.20
IUUC-Bra-017196	Brassica rapa	37.68	2.00e-17	82.40
IUUC-Gma-043261	Glycine max	43.09	2.00e-21	93.60
IUUC-Mtr-058301	Medicago truncatula	61.29	3.00e-17	79.30
IUUC-Pop-099029	Populus trichocarpa	41.86	9.00e-20	87.80
IUUC-Ppe-101276	Prunus persica	45.07	3.00e-29	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence