iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099615

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTR_0005s18790g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s18790	POPTR_0005s18790.1	POPTR_0005s18790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-21	76.0	63	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+++af ++  +l+sGs D  i +W+l++g+ +k
   Q: 63   GHREPVYSVAFsPNgEYLASGSLDRCINIWSLKEGKIVK 101
           8***********777*******************99887 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKQDKYVHDL REHSKEIYTI RWSPTGPGTN NPNQQLVLAS ASFDSTVKLW DVEFGKLLSS 60
LNGHREPVYS VAFSPNGEYL ASGSLDRCIN IWSLKEGKIV KTYTGNGGIF EVCWNKEGDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTGAGGTTA ATTGTGTCAA GTGGGATCCT ACAGGTTCAT TGTTGGCGTC TTGCTCTGAT 60
GATATCAGTG CTAAGGTTAT TATTTGTGCT ACCTTCTTTT GTCATCTATG AAGTTACATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0005s18790g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence