iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099209

Ensembl Protein ID

POPTR_0006s10720.1

UniProt Accession

B9HD96; B9HD96_POPTR

Genbank Protein ID

EEE92697.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_762562; POPTR_0006s10720g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s10720	POPTR_0006s10720.1	POPTR_0006s10720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-11	44.5	1343	1363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdD 22
           ++v+cl f +   ll++G+ D
   Q: 1343 GPVSCLTFhPYqVLLAAGATD 1363
           589*****9777999***988 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MALGDLMASR FSSQSPVAFV SNHYDHYPSS HEDDAIDVAR RDDNNNSNNN RDRDSDTAST 60
SNYGGGNATA STTATTTTST AYLPQTVVLC ELRHEAFEAS VPTGPSDSGL VSKWRPKDRM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAAAGACA AGAACAGCAA TCCTATTCTC CCTCATCATC TCTCTCCCCC TCTCTCCACT 60
TTATTTCTCT TTCTCCCTCT CTCGCTGCGC CTCCACACTG TCCCCCCACC ACCACAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR029030--Caspase-like_dom
IPR004083--Raptor
IPR029347--Raptor_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF14538--Raptor_N

SMART

SM01302--Raptor_N
SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0031931--C:TORC1 complex
GO:0030674--F:protein binding, bridging
GO:0071230--P:cellular response to amino acid stimulus
GO:0009267--P:cellular response to starvation
GO:0030307--P:positive regulation of cell growth
GO:0071902--P:positive regulation of protein serine/threonine kinase activity
GO:0010506--P:regulation of autophagy
GO:0008361--P:regulation of cell size
GO:0031929--P:TOR signaling

KEGG

pop:POPTR_0006s10720g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000354	Aegilops tauschii	67.52	0.00e+00	1624.00
IUUC-Atr-002704	Amborella trichopoda	76.23	0.00e+00	1665.00
IUUC-Apl-003540	Anas platyrhynchos	58.25	0.00e+00	776.00
IUUC-Aly-006524	Arabidopsis lyrata	76.23	0.00e+00	1961.00
IUUC-Ath-007242	Arabidopsis thaliana	76.30	0.00e+00	1965.00
IUUC-Ago-007709	Ashbya gossypii	50.84	1.00e-101	364.00
IUUC-Ame-011186	Astyanax mexicanus	56.44	0.00e+00	694.00
IUUC-Bgr-012085	Blumeria graminis	49.54	4.00e-169	588.00
IUUC-Bta-013422	Bos taurus	58.09	0.00e+00	775.00
IUUC-Bol-016048	Brassica oleracea	74.93	0.00e+00	2006.00
IUUC-Bra-016961	Brassica rapa	74.78	0.00e+00	2033.00
IUUC-Cel-018321	Caenorhabditis elegans	43.79	3.00e-91	330.00
IUUC-Cre-022818	Chlamydomonas reinhardtii	67.82	8.00e-116	409.00
IUUC-Csv-026362	Ciona savignyi	55.44	0.00e+00	721.00
IUUC-Cne-027009	Cryptococcus neoformans	43.79	3.00e-167	582.00
IUUC-Dre-028485	Danio rerio	57.85	0.00e+00	773.00
IUUC-Dse-031462	Dothistroma septosporum	44.54	2.00e-165	576.00
IUUC-Eeu-035140	Erinaceus europaeus	54.79	0.00e+00	678.00
IUUC-Fal-037244	Ficedula albicollis	58.09	0.00e+00	771.00
IUUC-Fox-037742	Fusarium oxysporum	48.80	2.00e-170	593.00
IUUC-Fso-038369	Fusarium solani	51.82	3.00e-163	569.00
IUUC-Gmo-039007	Gadus morhua	56.31	4.00e-132	465.00
IUUC-Gga-041121	Gallus gallus	58.25	0.00e+00	775.00
IUUC-Gac-041430	Gasterosteus aculeatus	57.85	0.00e+00	777.00
IUUC-Gma-043160	Glycine max	79.73	0.00e+00	2115.00
IUUC-Ggo-044934	Gorilla gorilla	58.22	0.00e+00	761.00
IUUC-Hvu-047823	Hordeum vulgare	73.27	0.00e+00	1555.00
IUUC-Kpa-049399	Komagataella pastoris	44.06	8.00e-170	590.00
IUUC-Lch-050405	Latimeria chalumnae	57.94	0.00e+00	774.00
IUUC-Lpe-050864	Leersia perrieri	84.16	0.00e+00	733.00
IUUC-Loc-051868	Lepisosteus oculatus	55.34	0.00e+00	730.00
IUUC-Laf-053339	Loxodonta africana	57.70	0.00e+00	775.00
IUUC-Meu-056642	Macropus eugenii	60.75	1.00e-177	616.00
IUUC-Mtr-058553	Medicago truncatula	78.00	0.00e+00	2100.00
IUUC-Mla-058907	Melampsora laricipopulina	41.16	3.00e-132	466.00
IUUC-Mga-059256	Meleagris gallopavo	58.25	0.00e+00	776.00
IUUC-Mvi-060457	Microbotryum violaceum	45.36	1.00e-168	587.00
IUUC-Mdo-062436	Monodelphis domestica	58.25	0.00e+00	775.00
IUUC-Mac-065524	Musa acuminata	72.55	0.00e+00	1845.00
IUUC-Opr-070548	Ochotona princeps	62.85	5.00e-112	399.00
IUUC-Ont-072485	Oreochromis niloticus	58.01	0.00e+00	775.00
IUUC-Ome-081293	Oryza meridionalis	70.13	0.00e+00	1360.00
IUUC-Opu-083423	Oryza punctata	72.66	0.00e+00	1745.00
IUUC-Olu-087760	Ostreococcus lucimarinus	44.80	0.00e+00	990.00
IUUC-Oar-089466	Ovis aries	54.34	0.00e+00	757.00
IUUC-Ppa-095301	Physcomitrella patens	58.77	0.00e+00	1380.00
IUUC-Pfo-096837	Poecilia formosa	57.55	0.00e+00	775.00
IUUC-Pca-100579	Procavia capensis	44.64	2.00e-59	224.00
IUUC-Ppe-101494	Prunus persica	82.78	0.00e+00	2166.00
IUUC-Ptt-103797	Puccinia triticina	33.75	4.00e-58	220.00
IUUC-Sce-106156	Saccharomyces cerevisiae	47.68	1.00e-97	351.00
IUUC-Sja-107888	Schizosaccharomyces japonicus	51.22	0.00e+00	635.00
IUUC-Smo-109363	Selaginella moellendorffii	56.92	0.00e+00	1380.00
IUUC-Sit-109752	Setaria italica	71.46	0.00e+00	1762.00
IUUC-Sly-110910	Solanum lycopersicum	79.44	0.00e+00	2106.00
IUUC-Stu-112814	Solanum tuberosum	81.43	0.00e+00	2090.00
IUUC-Sbi-113810	Sorghum bicolor	69.55	0.00e+00	1674.00
IUUC-Sre-115168	Sporisorium reilianum	40.84	6.00e-167	582.00
IUUC-Tgu-117361	Taeniopygia guttata	58.25	0.00e+00	775.00
IUUC-Tsy-119587	Tarsius syrichta	62.68	0.00e+00	724.00
IUUC-Tca-121570	Theobroma cacao	81.58	0.00e+00	2017.00
IUUC-Tre-122024	Trichoderma reesei	53.03	1.00e-165	577.00
IUUC-Tvi-122502	Trichoderma virens	52.86	3.00e-167	582.00
IUUC-Tae-125799	Triticum aestivum	72.95	0.00e+00	1774.00
IUUC-Tme-127001	Tuber melanosporum	50.87	4.00e-129	455.00
IUUC-Ttr-129128	Tursiops truncatus	56.18	0.00e+00	644.00
IUUC-Uma-129588	Ustilago maydis	41.32	6.00e-166	578.00
IUUC-Vvi-131611	Vitis vinifera	81.12	0.00e+00	2171.00
IUUC-Xtr-132727	Xenopus tropicalis	58.25	0.00e+00	776.00
IUUC-Yli-134358	Yarrowia lipolytica	48.63	2.00e-172	599.00
IUUC-Zma-135723	Zea mays	66.97	0.00e+00	1590.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence