iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099997

Ensembl Protein ID

POPTR_0006s14760.1

UniProt Accession

B9HDV8; B9HDV8_POPTR

Genbank Protein ID

EEE91795.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_561024; POPTR_0006s14760g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s14760	POPTR_0006s14760.1	POPTR_0006s14760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.10e-08	34.8	200	250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cge+++ ++  ++C++C++wfH +C+k++     +  +++ Cp+C++
   Q: 200  TLCGACGENYAADEFWICCDICEKWFHGKCVKIT-PARAEHIKQYKCPSCSN 250
           67************99******************.666666677******86 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDGGAQYNPR TVEEVFRDLK GRRAGMIKAL TTDVEEFYQR CDPEKENLCL YGFPNEQWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDA WLLAVAFYFG SRFGFDKTDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTAAAATCT GATTTGAAGG ATGGAAGAAC ACCCTCCCAG TCTCAGATGA TGATGATTGC 60
CGAAAAAATA TTAAAAACTA CTACTTGAGC TGAAGGAAGG AAGGAAGCAA ACAACAAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

pop:POPTR_0006s14760g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence