iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099231

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_587376; POPTR_0006s17790g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s17790	POPTR_0006s17790.1	POPTR_0006s17790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.90e-08	33.8	53	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f+ g   + +pCgHv+h+ C+ ++       s + +CPlCr
   Q: 53   CAVCMEGFQSGigGKKVPCGHVYHEACISAL------LSHRHSCPLCR 94
           ********554446679***********999......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASNPFSSCL IDTSFDLDEA LTLPQNLSQQ ITYSNSTIVA DMPTALTTGD AVCAVCMEGF 60
QSGIGGKKVP CGHVYHEACI SALLSHRHSC PLCRCDISG 99

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Nucleotide Sequence
(Fasta)

ATGGCATCAA ACCCTTTTTC GAGCTGTCTA ATCGATACGA GCTTTGATCT CGATGAGGCC 60
CTAACCCTGC CTCAGAATTT AAGCCAACAA ATCACATATT CAAACTCTAC CATTGTAGCT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s17790g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043326	Glycine max	48.89	5.00e-17	78.60
IUUC-Mtr-058193	Medicago truncatula	36.04	4.00e-13	65.90
IUUC-Ppe-101335	Prunus persica	41.32	6.00e-18	82.00
IUUC-Sly-111380	Solanum lycopersicum	35.96	4.00e-13	65.10
IUUC-Stu-112686	Solanum tuberosum	37.23	3.00e-14	68.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence