iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131473

UUCD1 version

UUC-ViV-00544

Ensembl Protein ID

VIT_04s0008g04890.t01

UniProt Accession

F6H3T5; F6H3T5_VITVI

Genbank Protein ID

CCB46772.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595231

Gene Name

VIT_04s0008g04890

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0008g04890	VIT_04s0008g04890.t01	VIT_04s0008g04890.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-24	84.4	712	741
UBD/Beta-Prp	2.50e-48	165.4	660	801

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+  +t+++f ++ ++l+++s D+t++vWD
   Q: 712  HSMLITDVRFsPSmPRLATSSFDKTVRVWD 741
           66779******777**************** PP

UBD/Beta-Prp

   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktg 169
           t++ v+++++  ++v +++fs +g+ l+sG+hd+ + +w ++t +    tl++h+ +++ v+++p+   l+++s D+tvr+Wd  +t 
   Q: 660  TFTEVSSVRASASKVICCHFSSDGKLLASGGHDKKAVLWYTDTLKTKT-TLEEHSMLITDVRFSPSMPRLATSSFDKTVRVWDAdSTS 746
           555566666666666666666666666666666666666666666666.666666666666666666666666666666666664555 PP
   S: 170  kllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdn 224
             lrt+tg h  sv sl+f++n+   + s++ dg +++w++++g+c r ++g t++
   Q: 747  YSLRTFTG-HSASVMSLDFHPNQdDLICSCDGDGEIRYWNIKNGSCARVFKGGTAQ 801
           56666666.66666666666666344456666666666666666666666666655 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIHDYL VKRDLKASAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE IEMIDAVLKT RAHLFPALLA KLFLKFQMKL LLPLHNSGWF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCTTCAAA GGTGGAAGAA GCTGAAAAAG GCATTATCTT AGAATCTGAC AGTATTATTA 60
TCCGCTCTTT GTGTGAGGTT TTGGATACAG CATCATGTCT CAAACCAACT GGGAAGCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR000253--FHA_dom
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	61.72	0.00e+00	742.00
IUUC-Atr-002973	Amborella trichopoda	74.20	0.00e+00	861.00
IUUC-Aly-006446	Arabidopsis lyrata	74.61	0.00e+00	1001.00
IUUC-Ath-006594	Arabidopsis thaliana	70.93	0.00e+00	987.00
IUUC-Bdi-014395	Brachypodium distachyon	62.71	0.00e+00	747.00
IUUC-Bol-015720	Brassica oleracea	73.98	0.00e+00	941.00
IUUC-Bra-017481	Brassica rapa	73.18	0.00e+00	978.00
IUUC-Gma-043258	Glycine max	80.87	0.00e+00	1031.00
IUUC-Hvu-047773	Hordeum vulgare	67.27	6.00e-148	516.00
IUUC-Lpe-051125	Leersia perrieri	60.55	0.00e+00	720.00
IUUC-Mtr-058613	Medicago truncatula	78.82	0.00e+00	1028.00
IUUC-Mac-064770	Musa acuminata	66.80	0.00e+00	870.00
IUUC-Oba-075419	Oryza barthii	59.50	0.00e+00	712.00
IUUC-Obr-076118	Oryza brachyantha	60.32	0.00e+00	744.00
IUUC-Ogl-077064	Oryza glaberrima	62.27	0.00e+00	782.00
IUUC-Ogu-078816	Oryza glumaepatula	58.84	0.00e+00	692.00
IUUC-Oin-079222	Oryza indica	58.97	0.00e+00	696.00
IUUC-Olo-080338	Oryza longistaminata	58.87	0.00e+00	649.00
IUUC-Oni-082753	Oryza nivara	59.10	0.00e+00	710.00
IUUC-Opu-083283	Oryza punctata	58.05	0.00e+00	683.00
IUUC-Oru-084538	Oryza rufipogon	59.37	0.00e+00	708.00
IUUC-Osa-086142	Oryza sativa	62.53	0.00e+00	785.00
IUUC-Ppa-095985	Physcomitrella patens	68.30	3.00e-162	563.00
IUUC-Pop-098994	Populus trichocarpa	84.04	0.00e+00	1066.00
IUUC-Ppe-102018	Prunus persica	80.18	0.00e+00	1070.00
IUUC-Smo-108724	Selaginella moellendorffii	59.17	0.00e+00	730.00
IUUC-Sit-109866	Setaria italica	62.11	0.00e+00	779.00
IUUC-Sly-110921	Solanum lycopersicum	79.32	0.00e+00	971.00
IUUC-Sbi-113848	Sorghum bicolor	61.96	0.00e+00	771.00
IUUC-Tca-121720	Theobroma cacao	82.21	0.00e+00	1049.00
IUUC-Tae-124192	Triticum aestivum	61.12	0.00e+00	769.00
IUUC-Tur-126743	Triticum urartu	54.70	0.00e+00	673.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence