iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099646

Ensembl Protein ID

POPTR_0007s01180.1

UniProt Accession

U5FHE1; U5FHE1_POPTR

Genbank Protein ID

ERP50543.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTR_0017s04650g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s01180	POPTR_0007s01180.1	POPTR_0007s01180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-11	43.0	79	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWD 29
           +v+c++f  d  +++sGsdD ++++W 
   Q: 79   RVFCVKFsCDaSYVISGSDDTNLRLWK 105
           6******98899**************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEPMNFTAAN EDCNCYSYDA RKFDEAKCVH KDHVSAVMDI DFSPTGREFV TGSYDRTVRI 60
FQYNGGHSRE IYHTKRMQRV FCVKFSCDAS YVISGSDDTN LRLWKAKASE QLGILLPREQ 120

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Nucleotide Sequence
(Fasta)

ACAAAAACTA ATTCTATTTC TTGGAACCCA ATGGAGCCCA TGAACTTCAC AGCTGTAAGC 60
ACATGAGCTG ATGCATTCCT TAAAACTTGT GTTTTTAATT TCTGAGTATT TGGGAATCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

pop:POPTR_0017s04650g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence