iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111280

Ensembl Protein ID

Solyc11g010330.1.1

UniProt Accession

K4D5J4; K4D5J4_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g010330.1	Solyc11g010330.1.1	Solyc11g010330.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-07	31.9	154	196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C H+fh  C+  w       + + +CPlCr
   Q: 154  CSVCLTEFeeDESLRLLPkCSHAFHIPCIDTW------LRSHKNCPLCR 196
           ********7655599999**************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAFFNRKMLE EHIFDVPKSV KCLSCTSYVC TNDCGDTYVP SDGPFFPPPP PPYVTSEKYH 60
MPFYFIIMLC VFGAFFMFIC YMIILRRSRS NSRPNNVSQF DETREDFVID ENLGPMLDHP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTTTT TTAATAGAAA GATGTTAGAA GAACATATAT TTGATGTACC AAAAAGTGTT 60
AAATGTTTGA GTTGTACATC ATACGTTTGT ACAAATGATT GTGGTGATAC ATATGTTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014119	Brachypodium distachyon	63.29	1.00e-27	116.00
IUUC-Lpe-051048	Leersia perrieri	64.56	5.00e-30	124.00
IUUC-Mtr-058706	Medicago truncatula	35.26	1.00e-46	179.00
IUUC-Ogl-077013	Oryza glaberrima	59.09	3.00e-26	111.00
IUUC-Ogu-078886	Oryza glumaepatula	57.95	6.00e-26	110.00
IUUC-Oin-079205	Oryza indica	59.09	3.00e-26	112.00
IUUC-Ome-081516	Oryza meridionalis	59.09	2.00e-26	112.00
IUUC-Oni-082231	Oryza nivara	59.09	3.00e-26	112.00
IUUC-Opu-084102	Oryza punctata	62.20	1.00e-29	123.00
IUUC-Oru-085019	Oryza rufipogon	59.09	3.00e-26	112.00
IUUC-Osa-085718	Oryza sativa	59.09	2.00e-26	112.00
IUUC-Pop-098897	Populus trichocarpa	41.62	2.00e-54	205.00
IUUC-Ppe-101478	Prunus persica	51.39	2.00e-49	189.00
IUUC-Sit-110484	Setaria italica	60.76	8.00e-24	103.00
IUUC-Stu-112147	Solanum tuberosum	81.23	2.00e-165	573.00
IUUC-Sbi-114872	Sorghum bicolor	61.54	9.00e-26	110.00
IUUC-Tca-121350	Theobroma cacao	42.25	3.00e-54	205.00
IUUC-Tae-123532	Triticum aestivum	59.09	1.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence