iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099710

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_563056; POPTR_0007s11930g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s11930	POPTR_0007s11930.1	POPTR_0007s11930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-31	108.3	198	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d ++cl++  d t+l s+s+D+t kvW+++  ++l 
   Q: 198  HSDAISCLSLsEDkTFLYSSSWDKTFKVWRISNSRCLE 235
           **********8667****************99888875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

STHPGGRPYK LPGLIKKTNL PADNDDDFFN TRNSQDQVVT PSNSSSPYNI VSPVEKSPRS 60
SQRITNIPFE DNDDNFSPNV LMGSLVREEG HIYSLAASGD LLYTGSDSKN IRVWKNQKEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAACACACC CTGGTGGTCG ACCTTATAAG CTACCAGGAC TGTGATTTGC ATAACTAAGC 60
ATGGGCTACA TGGCATTGGA TTCATTTGGG TTTAATTAGT TTTACTATTA CAGCCTAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0007s11930g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007546	Arabidopsis thaliana	64.66	2.00e-152	531.00
IUUC-Bra-018078	Brassica rapa	65.81	2.00e-150	524.00
IUUC-Gma-043117	Glycine max	68.00	5.00e-153	533.00
IUUC-Mtr-057896	Medicago truncatula	67.37	3.00e-154	537.00
IUUC-Ppe-101450	Prunus persica	71.80	5.00e-166	576.00
IUUC-Stu-112836	Solanum tuberosum	63.77	4.00e-153	533.00
IUUC-Tca-121487	Theobroma cacao	77.07	4.00e-177	613.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence