iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112174

Ensembl Protein ID

PGSC0003DMT400009035

UniProt Accession

M0ZVH3; M0ZVH3_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400003511	PGSC0003DMT400009035	PGSC0003DMT400009035

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.20e-27	94.3	259	331

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+Cp+s  lM dPvv++sG+ty+r  Iekw+a+g+ tcP+t+++l + + +Pn+++++li++w +++++
   Q: 259  LPDEFKCPLSSRLMYDPVVIASGQTYERFWIEKWFAQGNDTCPKTKRKLVHLSSTPNNSMKDLISRWTAAHGV 331
           79*******************************************************************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGSDAASVAG IPSPRDIKVH RLMCMELIKF VTRVAMLLPA IEEARPGSNP GIQVLCQLTR 60
ALDKAKGILQ HCSESSKLYL ALTGNVILSR CNKSIKLLEQ SLSCVQNMVP VMLATQISQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAATTGT ATCTTTATGC TTAGTGCGGT CTTCTTTGGA GTTTCGAAAC TAGTACTATT 60
ATTATGTGTT GACTCTTGAC AAAATTGAGC TCTCTCATAT TCAAGAAAAA TTCTTCCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102583140

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	35.84	9.00e-112	397.00
IUUC-Ath-006905	Arabidopsis thaliana	33.07	3.00e-101	361.00
IUUC-Bdi-014593	Brachypodium distachyon	36.93	4.00e-113	401.00
IUUC-Bol-016241	Brassica oleracea	35.92	8.00e-103	366.00
IUUC-Bra-018043	Brassica rapa	36.01	1.00e-113	402.00
IUUC-Gma-044030	Glycine max	43.38	1.00e-153	535.00
IUUC-Hvu-047756	Hordeum vulgare	35.44	7.00e-108	383.00
IUUC-Lpe-050784	Leersia perrieri	36.21	6.00e-102	364.00
IUUC-Mtr-058215	Medicago truncatula	44.44	9.00e-146	509.00
IUUC-Mac-064841	Musa acuminata	36.70	2.00e-115	409.00
IUUC-Oba-075842	Oryza barthii	36.22	2.00e-105	375.00
IUUC-Obr-076217	Oryza brachyantha	36.98	2.00e-105	375.00
IUUC-Ogl-077921	Oryza glaberrima	36.22	3.00e-105	375.00
IUUC-Ogu-078199	Oryza glumaepatula	36.35	6.00e-105	374.00
IUUC-Oin-079116	Oryza indica	36.51	7.00e-106	377.00
IUUC-Olo-080352	Oryza longistaminata	35.86	7.00e-100	357.00
IUUC-Ome-081110	Oryza meridionalis	36.35	2.00e-105	375.00
IUUC-Oni-082415	Oryza nivara	36.51	2.00e-105	376.00
IUUC-Opu-083658	Oryza punctata	35.92	6.00e-102	363.00
IUUC-Oru-084974	Oryza rufipogon	36.21	9.00e-105	373.00
IUUC-Osa-086052	Oryza sativa	36.36	3.00e-105	375.00
IUUC-Pop-099657	Populus trichocarpa	47.98	2.00e-176	611.00
IUUC-Ppe-101895	Prunus persica	46.03	4.00e-113	400.00
IUUC-Sit-110432	Setaria italica	35.74	5.00e-95	340.00
IUUC-Sly-111406	Solanum lycopersicum	95.15	0.00e+00	1281.00
IUUC-Sbi-113885	Sorghum bicolor	35.80	1.00e-89	323.00
IUUC-Tca-121394	Theobroma cacao	46.71	9.00e-171	592.00
IUUC-Tae-123767	Triticum aestivum	35.84	2.00e-112	399.00
IUUC-Tur-126678	Triticum urartu	35.23	2.00e-97	350.00
IUUC-Vvi-130887	Vitis vinifera	46.73	1.00e-165	575.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence