iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099066

Ensembl Protein ID

POPTR_0008s00330.1

UniProt Accession

B9HK11; B9HK11_POPTR

Genbank Protein ID

EEE89256.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_420057; POPTR_0008s00330g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s00330	POPTR_0008s00330.1	POPTR_0008s00330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-23	81.4	482	513
UBD/Beta-Prp	4.70e-43	148.6	220	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWD 29
           gH++ v+c+++   +  +l+s+sdDg i++W 
   Q: 482  GHSGAVNCVSWnpVNiYMLASASDDGAIRIWG 513
           8**********9766899*************7 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvw...dlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleet 132
            + l+ h++ev+ ++fs+dgk+l+++s+D+ + +w   d  + +  htl gh++ vl++s+sp+++ l++ ++d++ir wd + gqcl+  
   Q: 220  KQILQVHTDEVWFLQFSHDGKYLASSSKDQSAIIWqvmDGGKASWKHTLIGHQKPVLTVSWSPDDNQLLTCGEDEVIRRWDANLGQCLHVY 310
           456799*****************************54445588999*******************************************88 PP
   S: 133  lsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           +++  g+++c+ ++pdg+++ +G++++   lWd+ +g  l+ +++ +t ++  +++++ +  +vs+ +  t+ + d ++++c r+l+  ++
   Q: 311  EKIGVGFISCA-WSPDGRVILAGMTNKSFSLWDV-NGAELDCWEE-NTLRISEMAITDARDMIVSICRGDTIVFLDWEEKRC-RKLIQEEE 397
           88888888886.7888******************.89999***99.*******************************99985.78999999 PP
   S: 224  nvksvrfspnderl 237
            ++s  +s+++++l
   Q: 398  VITSFSLSKDNKFL 411
           99999999998887 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAQSLTSQRD VETVGSKGVI KRNEYVRIIT RALYSLNYNM TADLLQEESR IPLDSSEVKL 60
LQKQVLDGNW EESVKTLCTI SLLDKATRSL ASFLILEQKF LKFLRMDNNV LDALNVLRKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGATGGCTC AGTCTCTTAC CTCCCAAAGG GATGTGGAGA CAGTTGGCTC AAAAGGAGTC 60
ATAAAAAGAA ATGAATACGT CAGAATCATA ACAAGGGCAC TGTACTCACT CAATTATAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

KEGG

pop:POPTR_0008s00330g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001381	Ailuropoda melanoleuca	37.17	3.00e-78	285.00
IUUC-Ani-009455	Aspergillus nidulans	31.63	2.00e-62	233.00
IUUC-Cpo-022453	Cavia porcellus	37.26	1.00e-76	279.00
IUUC-Csv-026251	Ciona savignyi	37.33	1.00e-77	283.00
IUUC-Cme-027218	Cyanidioschyzon merolae	26.57	1.00e-54	207.00
IUUC-Eeu-034468	Erinaceus europaeus	50.38	3.00e-34	139.00
IUUC-Fal-036639	Ficedula albicollis	35.49	3.00e-78	285.00
IUUC-Gmo-038610	Gadus morhua	35.28	7.00e-81	294.00
IUUC-Gac-041352	Gasterosteus aculeatus	35.97	5.00e-82	298.00
IUUC-Pca-100574	Procavia capensis	41.35	2.00e-41	163.00
IUUC-Pgr-103411	Puccinia graminis	32.05	4.00e-31	130.00
IUUC-Tru-118471	Takifugu rubripes	35.42	3.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence