iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042912

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000835

Gene Name

GLYMA_02G264200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G43190	GLYMA02G43190.2	GLYMA02G43190.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.80e-16	60.5	258	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 25   itydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++ydr sI++w++sg++tcP+ +q+l ++ l+Pn++l++l+q+wc++n++
   Q: 258  HSYDRISIAQWINSGHHTCPKSGQRLIHTALIPNYALKSLVQQWCHDNNV 307
           89********************************************9975 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MNNVLSAMMV SPGLLPSGTL LDSLIHVCNE VGSMEKFPLV HTRNVSTMIR RIKLLSSLFE 60
EIQETDTPLP PSSILCLTEL FSVIRRVKVL IQDCKDGSSL WSLIQLEFIS NQFYVLVKEM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTATTTTA ATGTAAGAAA TAGCCTTATA GAAGCTCTCA GAATAATCCA ATTCCTTGTA 60
GAGAGCAAAT TTTGCAAACC ATAAGAATGA ACAGAAACAT CCTCCTACTA AGGTAAGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002723	Amborella trichopoda	51.44	8.00e-122	431.00
IUUC-Cel-018336	Caenorhabditis elegans	37.17	7.00e-10	60.10
IUUC-Mtr-058278	Medicago truncatula	69.08	0.00e+00	748.00
IUUC-Pop-098818	Populus trichocarpa	65.32	0.00e+00	634.00
IUUC-Ppe-101201	Prunus persica	66.37	0.00e+00	677.00
IUUC-Sly-111580	Solanum lycopersicum	59.91	1.00e-133	470.00
IUUC-Stu-112508	Solanum tuberosum	60.25	1.00e-180	626.00
IUUC-Tca-121845	Theobroma cacao	65.36	0.00e+00	721.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence