iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017650

Ensembl Protein ID

Bra005504.1-P

UniProt Accession

M4CMR6; M4CMR6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005504	Bra005504.1	Bra005504.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-26	90.7	262	292
E3 activity/RING/U-box	2.80e-15	57.1	2	68
UBD/Beta-Prp	2.50e-45	155.9	220	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  d +l++++s D+t++vW+
   Q: 262  GHSKKVTSVKFvGDsDLVLTASADKTVRVWR 292
           8***********666***************6 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e+++ Pvv+  sG  ++r+ Ie +++++gk cPvt++plt +d+vP +t + l  + +++ s
   Q: 2    NCAISGEVPEVPVVSTkSGLLFERRLIETHISDYGK-CPVTGEPLTIDDIVPIKTGKVLKPKLLHTAS 68
           7*************999*******************.********************99999888766 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw.dls..tgkcvhtlkghedsvlsl 100
           ++k  i+++++  +k+++atg+ d+t  ++d  +g+ l++l gh+++vt+vkf  d+++ +t+s D+t++vw d    ++ c htl+ h+++v+++
   Q: 220  TNKPGICSMDILYSKDVIATGGVDATAVIFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRVWrDSGdgQYACGHTLNDHSEEVRAV 315
           566678888888899999999999999999999999999999999999999999999999999999999999644467788999999999999999 PP
   S: 101  sfspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkel 195
           +++++++++vs+s d+t   +dl++g cl +  ++ ++   + +++hpdg +l +G+  ++v++Wd+k++  + ++ g ht+ v+s+sf++ng +l
   Q: 316  TVHATNKYFVSASLDSTWCFYDLSSGLCLAKvADDSEKVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVARFDG-HTGEVTSISFSENGYFL 410
           999999999999999999999999999999977777777889999999999999999999999999999999999998.99999999999999999 PP
   S: 196  vsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderl 237
           +++++dg vklwdl++ +  r++   +   +sv+f+p + +l
   Q: 411  ATAAEDG-VKLWDLRKLRNFRSFSSAD--ANSVEFDPSGSYL 449
           9999998.8999998777666665544..4566666666655 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNCAISGEVP EVPVVSTKSG LLFERRLIET HISDYGKCPV TGEPLTIDDI VPIKTGKVLK 60
PKLLHTASIP GLLGTFQNEW DGLMLSNFAL EQQLHTARQE LSHALYQHDS ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTGTG CAAGTAAACT TTTTCGTTTT ATTCGCCTTC TCAATTTGCC GATTTAGGGT 60
TTCTCTTTTG GTTGATTTGG TGTTGTTATT TTATCCCGCA CAGTTTCTGG AGAAGTTCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002594	Amborella trichopoda	70.80	0.00e+00	750.00
IUUC-Aca-005272	Anolis carolinensis	43.70	3.00e-112	398.00
IUUC-Aly-006002	Arabidopsis lyrata	93.02	0.00e+00	924.00
IUUC-Ath-007696	Arabidopsis thaliana	92.76	0.00e+00	988.00
IUUC-Ago-007879	Ashbya gossypii	26.72	4.00e-31	129.00
IUUC-Acl-008335	Aspergillus clavatus	32.93	3.00e-59	222.00
IUUC-Afl-008527	Aspergillus flavus	33.01	2.00e-65	242.00
IUUC-Afu-008957	Aspergillus fumigatus	34.39	4.00e-70	258.00
IUUC-Ani-009280	Aspergillus nidulans	33.78	6.00e-62	231.00
IUUC-Ang-009746	Aspergillus niger	35.58	7.00e-66	244.00
IUUC-Aor-009905	Aspergillus oryzae	33.01	1.00e-67	249.00
IUUC-Ate-010412	Aspergillus terreus	33.62	1.00e-58	220.00
IUUC-Ame-011561	Astyanax mexicanus	41.54	4.00e-40	157.00
IUUC-Bol-016457	Brassica oleracea	98.48	0.00e+00	1070.00
IUUC-Cel-018271	Caenorhabditis elegans	39.53	7.00e-101	360.00
IUUC-Cja-019879	Callithrix jacchus	44.23	5.00e-110	390.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	45.45	1.00e-127	449.00
IUUC-Cin-025699	Ciona intestinalis	45.23	2.00e-103	369.00
IUUC-Csv-026128	Ciona savignyi	43.29	2.00e-113	402.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	31.98	3.00e-58	219.00
IUUC-Dre-028187	Danio rerio	43.69	5.00e-110	390.00
IUUC-Dme-031906	Drosophila melanogaster	45.66	5.00e-109	387.00
IUUC-Gmo-038713	Gadus morhua	43.88	4.00e-112	397.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.38	4.00e-113	401.00
IUUC-Gma-043635	Glycine max	76.35	0.00e+00	830.00
IUUC-Kpa-049195	Komagataella pastoris	43.17	9.00e-20	91.30
IUUC-Lch-050105	Latimeria chalumnae	44.53	2.00e-112	399.00
IUUC-Loc-052042	Lepisosteus oculatus	40.42	2.00e-77	282.00
IUUC-Lma-053143	Leptosphaeria maculans	34.14	2.00e-62	234.00
IUUC-Mor-057215	Magnaporthe oryzae	32.95	6.00e-55	207.00
IUUC-Mtr-057756	Medicago truncatula	73.79	0.00e+00	797.00
IUUC-Mvi-060441	Microbotryum violaceum	35.78	7.00e-74	271.00
IUUC-Mac-064972	Musa acuminata	73.55	0.00e+00	773.00
IUUC-Nfi-068504	Neosartorya fischeri	34.79	5.00e-71	261.00
IUUC-Ncr-068729	Neurospora crassa	31.75	2.00e-58	219.00
IUUC-Ont-071377	Oreochromis niloticus	44.27	2.00e-111	395.00
IUUC-Oin-079357	Oryza indica	68.28	0.00e+00	719.00
IUUC-Ola-086566	Oryzias latipes	43.44	3.00e-109	388.00
IUUC-Olu-087757	Ostreococcus lucimarinus	46.26	1.00e-117	416.00
IUUC-Oga-089010	Otolemur garnettii	42.91	3.00e-105	375.00
IUUC-Pfo-096390	Poecilia formosa	44.47	5.00e-111	394.00
IUUC-Pop-099854	Populus trichocarpa	76.88	0.00e+00	833.00
IUUC-Sce-106147	Saccharomyces cerevisiae	26.18	2.00e-26	113.00
IUUC-Sit-109873	Setaria italica	70.21	0.00e+00	763.00
IUUC-Sly-111673	Solanum lycopersicum	74.52	0.00e+00	794.00
IUUC-Stu-112125	Solanum tuberosum	75.48	0.00e+00	801.00
IUUC-Sbi-114696	Sorghum bicolor	64.26	0.00e+00	670.00
IUUC-Sre-115134	Sporisorium reilianum	35.43	5.00e-82	298.00
IUUC-Tru-117800	Takifugu rubripes	44.19	4.00e-113	401.00
IUUC-Tsy-118980	Tarsius syrichta	42.24	6.00e-98	350.00
IUUC-Uma-129626	Ustilago maydis	36.98	8.00e-87	313.00
IUUC-Vvi-131668	Vitis vinifera	78.42	0.00e+00	841.00
IUUC-Xtr-132186	Xenopus tropicalis	45.96	1.00e-99	356.00
IUUC-Xma-133212	Xiphophorus maculatus	43.30	2.00e-110	392.00
IUUC-Zma-135662	Zea mays	70.21	0.00e+00	764.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence