iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099667

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTR_0008s20180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s20180	POPTR_0008s20180.1	POPTR_0008s20180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-13	50.7	215	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           H+++v+ ++f ++  +ll sGsdD+ +kvWD 
   Q: 215  HKSDVNTVCFaDEagHLLYSGSDDNLCKVWDR 246
           9*********96665889*************5 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNRIHKITDQ CDDKVAAEGS SSSQGPNEIF YHEIAQLTKL RSRPHELLSK DMPGRSRLPV 60
STMKMLVGRE GNYSGRGRFS SADSCHVLNQ LDSRTYVSQF SDDGNLFVAG CQGSHIRIYN 120

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Nucleotide Sequence
(Fasta)

ATGAATAGGA TACATAAGAT TACTGATCAA TGTGATGATA AAGTTGCTGC CGAGGGATCC 60
TCTTCTAGTC AAGGACCCAA TGAGATTTTT TATCATGAGA TTGCTCAACT CACAAAGCTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0008s20180g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence