iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098829

Ensembl Protein ID

POPTR_0009s12390.1

UniProt Accession

U5G430; U5G430_POPTR

Genbank Protein ID

ERP57054.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTR_0009s12390g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s12390	POPTR_0009s12390.1	POPTR_0009s12390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-12	47.8	132	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +vt+++f s+  +++s+  D+t++vW+l++g +++
   Q: 132  GHSKDVTDFDFsSNnQYIASAFMDKTVRVWELSKGICIR 170
           8***********555******************999976 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

VCDFRNYIRR PRNWDNLPSH QSTPGNSGRW LQSTSPLSHL FEVDSWTSSQ NLRSINPSST 60
RRTSFSSTAS DNDSLRRRGP EPASSFVGMH CIFDQCKAAA PSFFLYAVTV LKFGYMSSDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATGTGACT TTCGTAATTA CATTCGCAGG CCAAGAAATT GGGACAATTT GCCAAGCCAC 60
CAAAGCACTC CGGGAAACAG GTTGCTGACA CTTTACTTGA GTGCAGCTGG TTGTGTATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0009s12390g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence