iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112893

Ensembl Protein ID

PGSC0003DMT400043704

UniProt Accession

M1BF37; M1BF37_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400016973	PGSC0003DMT400043704	PGSC0003DMT400043704

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-24	86.8	340	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvW 28
           gHt  + cl    s +ll sGs D t+++W
   Q: 340  GHTKAILCL-InvS-DLLFSGSADRTVRIW 367
           89999***8.6534.9************** PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKFRSWISSS SSVNTAIDHP VPPPKGLFPD DASNFSDLPS STTSPSLFSQ ETNSLSSLQS 60
NLSLLTLPSV PSLQNLSPGT LNLAISARCL NSLNPRNAHV TFLAMHNNLL YAASSNEINV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCCTCTT TTCAAAAACA CAAAAAAAAC CCACACAACA CGTAAAAACA CATATTCTTT 60
TGTATATCCC GCCGGCAACA TGAAATTCCG ATCATGGATT TCATCTTCCT CCTCCGTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

sot:102601999

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	50.53	6.00e-95	339.00
IUUC-Aly-006280	Arabidopsis lyrata	57.14	3.00e-113	400.00
IUUC-Ath-006951	Arabidopsis thaliana	57.14	1.00e-112	398.00
IUUC-Bol-015247	Brassica oleracea	58.77	2.00e-117	414.00
IUUC-Bra-017464	Brassica rapa	57.66	8.00e-115	405.00
IUUC-Gma-043162	Glycine max	59.31	3.00e-118	417.00
IUUC-Mtr-057789	Medicago truncatula	61.79	2.00e-124	437.00
IUUC-Mac-065257	Musa acuminata	51.45	2.00e-95	341.00
IUUC-Ogl-077746	Oryza glaberrima	40.65	2.00e-42	165.00
IUUC-Ogu-078557	Oryza glumaepatula	40.95	2.00e-42	165.00
IUUC-Oin-079061	Oryza indica	40.95	1.00e-42	166.00
IUUC-Oni-083112	Oryza nivara	40.95	1.00e-42	166.00
IUUC-Oru-084254	Oryza rufipogon	40.95	1.00e-42	166.00
IUUC-Osa-086021	Oryza sativa	40.95	8.00e-43	167.00
IUUC-Pop-100092	Populus trichocarpa	65.56	5.00e-134	469.00
IUUC-Ppe-101598	Prunus persica	58.94	1.00e-115	408.00
IUUC-Sly-111566	Solanum lycopersicum	93.66	0.00e+00	753.00
IUUC-Tca-121847	Theobroma cacao	63.28	1.00e-128	452.00
IUUC-Tae-123809	Triticum aestivum	41.90	1.00e-55	209.00
IUUC-Vvi-130905	Vitis vinifera	61.36	7.00e-131	459.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence