iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006068

Ensembl Protein ID

fgenesh2_kg.8__472__AT5G43420.1

UniProt Accession

D7MP62; D7MP62_ARALL

Genbank Protein ID

EFH41683.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_494656

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__472__AT5G43420.1	fgenesh2_kg.8__472__AT5G43420.1	fgenesh2_kg.8__472__AT5G43420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.40e-07	30.3	136	178

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f+d+  +++ p C H+fh dC+  w       +++++CPlCr
   Q: 136  CSVCLSEFQDEekLRIIPnCCHLFHIDCIDVW------LQNNANCPLCR 178
           ********55444999999*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDLSNRHNTL RDLSFPPPPP PPIFHRASST GTSFPILAVA VIGILATAFL LVSYYVFVIK 60
CCLNWHRIDI LHRFSLSRRR RNDQDPLMVY SPELRNRGLD ESVIRAIPIF KFKKRNDQND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTTTCCTC TGTTTTTCTT CTATACCAAT CTCTCTCTCT CTCTCTTCTT TCTTCAAGAA 60
CTTTCAAAGT TTTACTCTTT TATTCTCCAA TAGAGGATGA GATTGTTCTT ATAGCTAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_494656

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000279	Aegilops tauschii	34.43	2.00e-32	132.00
IUUC-Atr-003120	Amborella trichopoda	42.27	1.00e-47	182.00
IUUC-Ath-006598	Arabidopsis thaliana	89.52	2.00e-164	570.00
IUUC-Bdi-014676	Brachypodium distachyon	41.50	5.00e-29	119.00
IUUC-Bol-016276	Brassica oleracea	76.15	9.00e-137	479.00
IUUC-Bra-017431	Brassica rapa	71.76	2.00e-126	444.00
IUUC-Gma-044038	Glycine max	54.83	9.00e-76	276.00
IUUC-Hvu-047348	Hordeum vulgare	35.88	2.00e-34	139.00
IUUC-Lch-050560	Latimeria chalumnae	31.71	3.00e-15	74.70
IUUC-Mtr-057939	Medicago truncatula	49.70	4.00e-70	257.00
IUUC-Mac-065349	Musa acuminata	42.31	7.00e-56	210.00
IUUC-Ont-071559	Oreochromis niloticus	31.96	9.00e-13	67.40
IUUC-Opu-083709	Oryza punctata	33.78	1.00e-34	139.00
IUUC-Pop-098991	Populus trichocarpa	59.16	3.00e-82	298.00
IUUC-Ppe-101210	Prunus persica	60.33	4.00e-83	300.00
IUUC-Sit-110640	Setaria italica	31.31	3.00e-31	128.00
IUUC-Stu-111992	Solanum tuberosum	53.17	1.00e-73	269.00
IUUC-Tca-121116	Theobroma cacao	62.62	9.00e-103	365.00
IUUC-Tae-124958	Triticum aestivum	34.75	5.00e-33	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence