iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002585

Ensembl Protein ID

ERN01467

UniProt Accession

W1NV09; W1NV09_AMBTC

Genbank Protein ID

ERN01467.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI394767

Gene Name

AMTR_s00002p00268880

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00002p00268880	ERN01467	ERN01467

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.30e-22	77.9	263	331

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
             f+Cp+ +++M dPv l++G t +r++I+ wl+ g+ t+P t+q+l++ +l Pn  +r+ i++w+e+n
   Q: 263  NSFICPLKKDVMIDPVSLCTGTTCERAYIKAWLDGGNDTDPETGQHLDDFSLRPNVRMRESIEEWVERN 331
           68****************************************************************998 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MTSLMEVPIG ALLSLLLDQV IKTAKAAKDV LIEKESFKIL SKYLHDIEPV LKQLQLHELK 60
DSQSARRALE FLSEDVSTAQ SLIDKCTNRS RFYLLLKCRQ IVKEAQQATR DIGRSLASLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACATCAC TTATGGAAGT TCCCATTGGT GCCCTCTTGT CACTTCTATT GGACCAGGTG 60
ATCAAAACAG CCAAAGCAGC CAAGGATGTT CTCATAGAGA AAGAGAGTTT CAAGATCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043747	Glycine max	50.30	0.00e+00	901.00
IUUC-Mtr-058126	Medicago truncatula	48.25	0.00e+00	851.00
IUUC-Mac-064921	Musa acuminata	51.15	0.00e+00	889.00
IUUC-Pop-100009	Populus trichocarpa	52.61	0.00e+00	968.00
IUUC-Ppe-101705	Prunus persica	52.85	0.00e+00	921.00
IUUC-Smo-109574	Selaginella moellendorffii	38.73	1.00e-166	579.00
IUUC-Sly-111263	Solanum lycopersicum	56.75	5.00e-105	373.00
IUUC-Stu-112918	Solanum tuberosum	47.10	0.00e+00	891.00
IUUC-Tca-121788	Theobroma cacao	52.55	0.00e+00	953.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence