iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099643

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_723690; POPTR_0010s12960g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s12960	POPTR_0010s12960.1	POPTR_0010s12960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-45	150.3	693	730
UBD/Beta-Prp	1.20e-53	183.3	625	831

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H+  ++++++   ++ +++Gs+D+t+k+W + ++ ++k
   Q: 693  HKRIIWSCSWnpFGHQFATGSRDKTVKIWAVEQDSSVK 730
           9999******753378**************99887765 PP

UBD/Beta-Prp

   S: 32   gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.......tgkcvhtlkghedsvlslsfspsgdklvsGshd 115
           + i +w+v ++k++ +l+ h+ +vt+++fs+d+++l+ +s+Dr   v+ ++       +++ +   ++h++ ++s+s++p g+ +++Gs+d
   Q: 625  AEIWLWQVGSWKAVGRLQAHSLTVTQMEFSRDDSMLLAVSRDRQFSVFAIKgtgtdevSYQLLARQEAHKRIIWSCSWNPFGHQFATGSRD 715
           357899******************************************8888777776788888888************************ PP
   S: 116  rtirvwdletgqclee..tlsghdgvvncvvv...h.pdg.nllvsGslDrtvrlWdl.....ktgkllrtl..tgghtdsvyslsfdsng 192
           +t+++w +e+++ +++  tl + +++v+ +++   + +++  ll+ G+ ++ + lW+l     + ++l  ++  +  h +sv+ ls++   
   Q: 716  KTVKIWAVEQDSSVKQmmTLPQFSSSVTALSWvgiDrQSNhGLLAVGMENGLIELWSLtinksAAANLAVRFdtSLCHVSSVNRLSWRNPE 806
           ******************666666666665552222133358****************888888888888888855699*******87666 PP
   S: 193  .......kelvsgsldgtvklwdlq 210
                   +l+s++ d+ v+++d+ 
   Q: 807  kseecrrMQLASCGADQCVRVFDVI 831
           688899999**************85 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSGNKEESEV EVKSVFIGAG CNRVVNNVSW GASDLVSFGS QNAVAIFCPK TAQILTTLPG 60
HKASVNCTHW IPSTKFAFKA KQLDRHYLLS GDTDGAIILW ELTLAVKKWR QVLQLPQSHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGCAGAAG GTTTTGGCCG CTCTCTCAGC TCGATCGCTG CAGCAGTCAG CAAGTCTCTC 60
TCTTTCGAAG AAATTTTTGA GATTATTAAA AATAAGTTGA CGATGAGTGG AAATAAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0010s12960g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	63.84	0.00e+00	1039.00
IUUC-Aml-002049	Ailuropoda melanoleuca	35.70	1.00e-111	396.00
IUUC-Atr-002456	Amborella trichopoda	63.45	0.00e+00	1073.00
IUUC-Apl-004053	Anas platyrhynchos	37.79	3.00e-141	495.00
IUUC-Aca-004535	Anolis carolinensis	33.41	2.00e-119	422.00
IUUC-Aly-005746	Arabidopsis lyrata	69.01	0.00e+00	1162.00
IUUC-Ath-006664	Arabidopsis thaliana	67.78	0.00e+00	1134.00
IUUC-Ago-007971	Ashbya gossypii	29.87	2.00e-87	316.00
IUUC-Acl-008173	Aspergillus clavatus	32.83	2.00e-103	370.00
IUUC-Afl-008665	Aspergillus flavus	28.92	1.00e-42	167.00
IUUC-Afu-008976	Aspergillus fumigatus	31.32	3.00e-98	352.00
IUUC-Ani-009284	Aspergillus nidulans	31.10	1.00e-93	337.00
IUUC-Ang-009809	Aspergillus niger	30.81	2.00e-96	346.00
IUUC-Aor-009959	Aspergillus oryzae	32.83	2.00e-103	369.00
IUUC-Ate-010442	Aspergillus terreus	29.84	3.00e-97	348.00
IUUC-Ame-011409	Astyanax mexicanus	34.67	2.00e-123	436.00
IUUC-Bgr-012137	Blumeria graminis	32.48	2.00e-100	359.00
IUUC-Bta-012892	Bos taurus	36.38	2.00e-132	466.00
IUUC-Bci-013944	Botrytis cinerea	29.63	2.00e-96	346.00
IUUC-Bdi-014512	Brachypodium distachyon	63.91	0.00e+00	1094.00
IUUC-Bol-015741	Brassica oleracea	68.38	0.00e+00	1175.00
IUUC-Bra-017367	Brassica rapa	68.50	0.00e+00	1177.00
IUUC-Cel-018712	Caenorhabditis elegans	30.03	4.00e-72	265.00
IUUC-Cja-018865	Callithrix jacchus	32.98	5.00e-124	438.00
IUUC-Cfa-021006	Canis familiaris	36.01	2.00e-134	473.00
IUUC-Cpo-021370	Cavia porcellus	36.93	5.00e-135	474.00
IUUC-Csa-023845	Chlorocebus sabaeus	35.63	7.00e-133	467.00
IUUC-Cho-024640	Choloepus hoffmanni	35.33	3.00e-82	299.00
IUUC-Cin-025772	Ciona intestinalis	33.58	5.00e-109	388.00
IUUC-Csv-025891	Ciona savignyi	33.37	2.00e-113	402.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	31.53	6.00e-96	344.00
IUUC-Cne-027081	Cryptococcus neoformans	32.06	5.00e-98	352.00
IUUC-Cme-027225	Cyanidioschyzon merolae	25.39	6.00e-47	182.00
IUUC-Dre-028250	Danio rerio	36.24	2.00e-128	452.00
IUUC-Dno-028847	Dasypus novemcinctus	35.63	2.00e-133	469.00
IUUC-Dor-030351	Dipodomys ordii	34.75	2.00e-126	446.00
IUUC-Dse-031317	Dothistroma septosporum	30.63	5.00e-90	325.00
IUUC-Dme-032019	Drosophila melanogaster	33.96	8.00e-130	457.00
IUUC-Ete-033194	Echinops telfairi	35.92	4.00e-75	275.00
IUUC-Eca-033779	Equus caballus	36.30	3.00e-135	475.00
IUUC-Eeu-034790	Erinaceus europaeus	35.98	2.00e-78	286.00
IUUC-Fca-036090	Felis catus	37.55	2.00e-130	459.00
IUUC-Fal-037663	Ficedula albicollis	35.45	6.00e-129	454.00
IUUC-Fox-037828	Fusarium oxysporum	30.83	1.00e-103	370.00
IUUC-Fso-038462	Fusarium solani	32.54	6.00e-102	364.00
IUUC-Gmo-039450	Gadus morhua	34.50	2.00e-128	452.00
IUUC-Ggr-040023	Gaeumannomyces graminis	32.07	2.00e-91	330.00
IUUC-Gga-040480	Gallus gallus	37.54	2.00e-144	506.00
IUUC-Gac-041544	Gasterosteus aculeatus	35.90	2.00e-135	476.00
IUUC-Gma-044048	Glycine max	76.56	0.00e+00	1323.00
IUUC-Ggo-045381	Gorilla gorilla	33.68	9.00e-120	424.00
IUUC-Hsa-046096	Homo sapiens	32.90	2.00e-120	426.00
IUUC-Hvu-047494	Hordeum vulgare	65.19	0.00e+00	1112.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	32.02	3.00e-101	362.00
IUUC-Kpa-049241	Komagataella pastoris	28.89	4.00e-85	308.00
IUUC-Lch-050512	Latimeria chalumnae	40.06	1.00e-128	453.00
IUUC-Lpe-051448	Leersia perrieri	63.00	0.00e+00	1082.00
IUUC-Loc-051882	Lepisosteus oculatus	36.54	6.00e-140	491.00
IUUC-Lma-053023	Leptosphaeria maculans	32.44	2.00e-98	352.00
IUUC-Laf-054519	Loxodonta africana	36.66	4.00e-135	474.00
IUUC-Mcc-055580	Macaca mulatta	33.69	1.00e-124	440.00
IUUC-Meu-056606	Macropus eugenii	29.89	5.00e-46	179.00
IUUC-Mor-057109	Magnaporthe oryzae	32.62	8.00e-110	390.00
IUUC-Mpo-057297	Magnaporthe poae	30.57	2.00e-93	337.00
IUUC-Mtr-058348	Medicago truncatula	74.25	0.00e+00	1286.00
IUUC-Mla-059159	Melampsora laricipopulina	29.10	6.00e-88	318.00
IUUC-Mga-059778	Meleagris gallopavo	34.35	8.00e-83	300.00
IUUC-Mvi-060447	Microbotryum violaceum	29.35	1.00e-91	330.00
IUUC-Mmr-061139	Microcebus murinus	33.62	9.00e-126	444.00
IUUC-Mdo-061866	Monodelphis domestica	37.23	2.00e-142	499.00
IUUC-Mmu-063390	Mus musculus	36.42	4.00e-132	465.00
IUUC-Mac-064693	Musa acuminata	68.31	0.00e+00	1179.00
IUUC-Mpu-066547	Mustela putorius furo	35.55	8.00e-130	457.00
IUUC-Mlu-067156	Myotis lucifugus	36.83	2.00e-135	476.00
IUUC-Nfi-068616	Neosartorya fischeri	31.90	4.00e-100	358.00
IUUC-Ncr-068915	Neurospora crassa	32.19	7.00e-91	328.00
IUUC-Nle-069958	Nomascus leucogenys	35.48	1.00e-127	450.00
IUUC-Opr-071093	Ochotona princeps	34.66	9.00e-60	224.00
IUUC-Ont-072178	Oreochromis niloticus	36.01	3.00e-136	479.00
IUUC-Oan-073667	Ornithorhynchus anatinus	34.82	1.00e-127	450.00
IUUC-Ocu-074662	Oryctolagus cuniculus	36.36	1.00e-134	473.00
IUUC-Oba-075577	Oryza barthii	63.75	0.00e+00	1105.00
IUUC-Obr-076566	Oryza brachyantha	64.23	0.00e+00	1111.00
IUUC-Ogl-077054	Oryza glaberrima	63.67	0.00e+00	1101.00
IUUC-Ogu-078846	Oryza glumaepatula	63.63	0.00e+00	1104.00
IUUC-Oin-079084	Oryza indica	63.63	0.00e+00	1102.00
IUUC-Olo-080933	Oryza longistaminata	59.54	0.00e+00	972.00
IUUC-Ome-081500	Oryza meridionalis	60.22	0.00e+00	1023.00
IUUC-Oni-082352	Oryza nivara	63.38	0.00e+00	1095.00
IUUC-Opu-084116	Oryza punctata	61.85	0.00e+00	1075.00
IUUC-Oru-085249	Oryza rufipogon	63.63	0.00e+00	1102.00
IUUC-Osa-086270	Oryza sativa	63.63	0.00e+00	1102.00
IUUC-Ola-086625	Oryzias latipes	32.57	2.00e-108	386.00
IUUC-Olu-087638	Ostreococcus lucimarinus	34.39	4.00e-96	345.00
IUUC-Oga-088634	Otolemur garnettii	32.51	1.00e-115	410.00
IUUC-Oar-089475	Ovis aries	36.38	2.00e-132	466.00
IUUC-Ptr-091131	Pan troglodytes	35.40	2.00e-131	462.00
IUUC-Pan-092869	Papio anubis	35.32	1.00e-131	463.00
IUUC-Psi-093146	Pelodiscus sinensis	38.65	2.00e-123	436.00
IUUC-Pma-094479	Petromyzon marinus	34.72	1.00e-126	446.00
IUUC-Pno-095061	Phaeosphaeria nodorum	30.47	9.00e-61	227.00
IUUC-Ppa-095618	Physcomitrella patens	49.53	0.00e+00	811.00
IUUC-Pfo-096816	Poecilia formosa	35.95	3.00e-134	472.00
IUUC-Pab-097548	Pongo abelii	35.29	8.00e-131	460.00
IUUC-Pca-100983	Procavia capensis	35.36	2.00e-66	246.00
IUUC-Ppe-101301	Prunus persica	77.83	0.00e+00	1332.00
IUUC-Pva-102460	Pteropus vampyrus	35.62	1.00e-128	453.00
IUUC-Pgr-103507	Puccinia graminis	31.56	1.00e-96	347.00
IUUC-Ptt-103892	Puccinia triticina	30.38	1.00e-81	297.00
IUUC-Pte-104283	Pyrenophora teres	30.51	1.00e-94	340.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	30.95	7.00e-89	321.00
IUUC-Rno-105842	Rattus norvegicus	36.96	3.00e-135	475.00
IUUC-Sce-106459	Saccharomyces cerevisiae	28.17	2.00e-87	316.00
IUUC-Sha-106586	Sarcophilus harrisii	32.38	5.00e-82	298.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	29.71	6.00e-89	321.00
IUUC-Spo-108302	Schizosaccharomyces pombe	29.17	4.00e-88	318.00
IUUC-Smo-108861	Selaginella moellendorffii	51.11	0.00e+00	819.00
IUUC-Sit-109915	Setaria italica	64.54	0.00e+00	1133.00
IUUC-Sly-111714	Solanum lycopersicum	75.60	0.00e+00	1298.00
IUUC-Stu-112631	Solanum tuberosum	75.45	0.00e+00	1310.00
IUUC-Sar-113200	Sorex araneus	31.82	4.00e-106	378.00
IUUC-Sbi-114582	Sorghum bicolor	64.56	0.00e+00	1138.00
IUUC-Sre-115001	Sporisorium reilianum	27.27	2.00e-41	164.00
IUUC-Ssc-115519	Sus scrofa	36.78	1.00e-135	476.00
IUUC-Tgu-116987	Taeniopygia guttata	37.20	2.00e-139	489.00
IUUC-Tru-118476	Takifugu rubripes	36.07	6.00e-135	474.00
IUUC-Tsy-119230	Tarsius syrichta	38.37	2.00e-51	196.00
IUUC-Tni-120448	Tetraodon nigroviridis	33.99	3.00e-48	186.00
IUUC-Tca-121650	Theobroma cacao	77.16	0.00e+00	1356.00
IUUC-Tre-122086	Trichoderma reesei	31.30	6.00e-96	344.00
IUUC-Tvi-122397	Trichoderma virens	30.74	1.00e-88	320.00
IUUC-Tae-123972	Triticum aestivum	64.25	0.00e+00	1102.00
IUUC-Tur-126578	Triticum urartu	64.37	0.00e+00	1098.00
IUUC-Tme-126927	Tuber melanosporum	30.70	5.00e-100	358.00
IUUC-Tbe-127922	Tupaia belangeri	44.70	9.00e-45	174.00
IUUC-Ttr-128918	Tursiops truncatus	36.15	8.00e-134	470.00
IUUC-Uma-129474	Ustilago maydis	25.58	7.00e-43	169.00
IUUC-Vda-129944	Verticillium dahliae	32.18	6.00e-93	335.00
IUUC-Vpa-130693	Vicugna pacos	38.65	4.00e-127	448.00
IUUC-Vvi-130949	Vitis vinifera	78.70	0.00e+00	1382.00
IUUC-Xtr-132639	Xenopus tropicalis	33.74	6.00e-132	464.00
IUUC-Xma-134223	Xiphophorus maculatus	38.07	2.00e-83	302.00
IUUC-Yli-134601	Yarrowia lipolytica	32.14	6.00e-92	331.00
IUUC-Zma-135952	Zea mays	63.99	0.00e+00	1122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence