iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043323

UUCD1 version

UUC-GlM-01356

Ensembl Protein ID

GLYMA13G31790.1

UniProt Accession

I1M2A4; I1M2A4_SOYBN

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Gene Name

LOC100776214

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G31790	GLYMA13G31790.1	GLYMA13G31790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-35	120.6	140	178
UBD/Beta-Prp	4.70e-56	191.8	5	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +++ ++f +d + +vsG+ D+++kvWDl+ g+ll+
   Q: 140  GHSQGISIIKFtPDgRWVVSGGFDNVVKVWDLTAGKLLH 178
           899*********99999******************9986 PP

UBD/Beta-Prp

   S: 126  gqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           g++++  +  h+++vnc+++ +++ +l+++G++D +v+lW +   + ++ l+g ht++v+s++fds    ++ g+  g +klwdl++ ++vrt+
   Q: 5    GYKIQ-EFVAHSASVNCLNIGKKAcRLFITGGDDHKVNLWTIGKPTPITSLSG-HTSPVESVAFDSGEVLVLGGASTGVIKLWDLEEAKMVRTV 96
           67777.7889******************************************9.**************************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisva 271
            gh++n + v+f+p +e+++sgs+D  ++iWd+r++ +++t+++h + ++ ++
   Q: 97   AGHRSNCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHSQGISIIK 149
           ********************************************998887765 PP

Organism

Glycine max

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MAKRGYKIQE FVAHSASVNC LNIGKKACRL FITGGDDHKV NLWTIGKPTP ITSLSGHTSP 60
VESVAFDSGE VLVLGGASTG VIKLWDLEEA KMVRTVAGHR SNCTAVEFHP FGEFFASGSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGCAAGAG GAGAGGAAAG TATTTATTGA GAAAAATAAA TTCCTAGCCA TAATTTTCAT 60
TCCCCTTTCT CATTTCTCAC TGTTGAATCT GTATTCTTCT TCTTCTTCAT CTTTTTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

KEGG

gmx:100776214

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005897	Arabidopsis lyrata	62.02	0.00e+00	630.00
IUUC-Ath-006624	Arabidopsis thaliana	63.25	0.00e+00	651.00
IUUC-Bdi-014531	Brachypodium distachyon	45.54	0.00e+00	661.00
IUUC-Opu-083637	Oryza punctata	39.61	2.00e-173	603.00
IUUC-Pop-100006	Populus trichocarpa	65.65	0.00e+00	847.00
IUUC-Ppe-101697	Prunus persica	63.52	0.00e+00	1020.00
IUUC-Sit-110364	Setaria italica	44.22	0.00e+00	660.00
IUUC-Tca-121590	Theobroma cacao	62.61	0.00e+00	822.00
IUUC-Tur-126181	Triticum urartu	41.98	0.00e+00	629.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence