iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s11410	POPTR_0011s11410.3	POPTR_0011s11410.3
POPTR_0011s11410	POPTR_0011s11410.2	POPTR_0011s11410.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.80e-17	64.6	29	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 260  dlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
            ls+f + +++    + +Y+L++ +vHsG s++sGHY+ay+k+  g+W++++Ds+Vt ++ +evl+   ++ Yvlf+ r
   Q: 29   FLSSFFNPSQD---PQPEYNLFGTIVHSGySPESGHYYAYIKDAMGRWYCCNDSYVTLSTLQEVLS---EKVYVLFFSR 101
           55665555333...379*************************************************...*******987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIAYKNDKAV HIFFGLSVSC YGIFYIYLFL SSFFNPSQDP QPEYNLFGTI VHSGYSPESG 60
HYYAYIKDAM GRWYCCNDSY VTLSTLQEVL SEKVYVLFFS RTNQRPASAA SSFASYGVKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTGCAT ATAAAAATGA TAAGGCAGTA CATATATTTT TTGGGGTCCC ATGTTTATAG 60
AAGAATTGAT GGGAAGTCGA AGTACATTAT GATATGTTAG TTAAAGTAAT TTCTTTGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s40500g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence