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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007424
UUCD1 version UUC-ArT-01456
Ensembl Protein ID AT3G15150.1
UniProt Accession Q8GYH7; Q9LIM0; NSE2_ARATH
Genbank Protein ID BAB02569.1; AEE75625.1; ABH04524.1; BAC42272.1
Protein Name E3 SUMO-protein ligase MMS21; MMS21 homolog; Protein HIGH PLOIDY 2
Genbank Nucleotide ID AP001299; CP002686; BT026417; AK117616
Gene Name MMS21; HPY2; At3g15150; F4B12.6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G15150 AT3G15150.1 AT3G15150.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexPINAHINTMentha
Post-translational Modifications (PTMs)
UniProt
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/RING RING 19682286
Classification
Family E-value Score Start End
E3 activity/RING/RING 0.0015 19.9 159 201
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPl 44
           C++   +     d++++++C Hv+ ++ + ++     + +++++CP+
   Q: 159  CPLSGKPVtelADPVRSMDCRHVYEKSVILHY----IVNNPNANCPV 201
           55554433444899***************999....99********6 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     E3 SUMO-protein ligase that modulates cell cycle progression and functions as a repressor of endocycle onset in meristems. May function downstream of the meristem patterning transcription factors PLETHORA 1 and 2 (PLT1 and PLT2) in root meristem development. Modulates the expression of the mitotic cyclins CYCB1-1 and CYCB1-2 and cyclin-dependent kinases CDKB1-1 and CDKB2-1 in root meristem. Involved in cytokinin signaling in root development.
 E3 SUMO-protein ligase that modulates cell cycle progression and functions as a repressor of endocycle onset in meristems. May function downstream of the meristem patterning transcription factors PLETHORA 1 and 2 (PLT1 and PLT2) in root meristem development. Modulates the expression of the mitotic cyclins CYCB1-1 and CYCB1-2 and cyclin-dependent kinases CDKB1-1 and CDKB2-1 in root meristem. Involved in cytokinin signaling in root development.
Protein Sequence
(Fasta)
MASASSSDGV AGRIQNASLV LVSDNSSTLA DIRKAVAMMK NIAVQLEKEN QTDKVKDLEN 60
SVAELLDLHS DCNHRSTAIQ SVANRYQPVE QLTDFKKLLD DEFTKLKATP SSVPQNDHLM 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007424|E3,RING|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
CTCACTCTTT CCGTCTTCTG ATTTCTCCCT CCAAAACAAA CCTCGGAAGA GAAAATTGGA 60
GCGAAGGAGC GATAGATATG GCGTCGGCGT CCTCGTCTGA CGGAGTTGCC GGAAGGATTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007424|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0131--Cell cycle
KW-0181--Complete proteome
KW-0932--Cytokinin signaling pathway
KW-0963--Cytoplasm
KW-0436--Ligase
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR026846--Nse2(Mms21)
IPR004181--Znf_MIZ
IPR013083--Znf_RING/FYVE/PHD
Pfam

PF11789--zf-Nse
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0016874--F:ligase activity
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0007049--P:cell cycle
GO:0006974--P:cellular response to DNA damage stimulus
GO:0009736--P:cytokinin-activated signaling pathway
GO:0000724--P:double-strand break repair via homologous recombination
GO:0060250--P:germ-line stem-cell niche homeostasis
GO:0032876--P:negative regulation of DNA endoreduplication
GO:0008284--P:positive regulation of cell proliferation
GO:0080038--P:positive regulation of cytokinin-activated signaling pathway
GO:0045931--P:positive regulation of mitotic cell cycle
GO:0016925--P:protein sumoylation
GO:0048509--P:regulation of meristem development
GO:0010082--P:regulation of root meristem growth
KEGG ath:AT3G15150
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000276 Aegilops tauschii 50.00 7.00e-56 209.00
IUUC-Atr-002438 Amborella trichopoda 46.85 1.00e-54 205.00
IUUC-Apl-004091 Anas platyrhynchos 32.99 9.00e-05 37.70
IUUC-Aca-004433 Anolis carolinensis 24.77 7.00e-11 60.10
IUUC-Aly-006133 Arabidopsis lyrata 95.98 6.00e-142 495.00
IUUC-Ame-010902 Astyanax mexicanus 26.20 5.00e-09 53.90
IUUC-Bgr-012088 Blumeria graminis 27.00 4.00e-04 38.50
IUUC-Bdi-014403 Brachypodium distachyon 46.78 5.00e-57 213.00
IUUC-Bol-015454 Brassica oleracea 78.90 9.00e-115 405.00
IUUC-Bra-017093 Brassica rapa 67.51 1.00e-99 355.00
IUUC-Cel-018588 Caenorhabditis elegans 31.11 4.50e-02 30.40
IUUC-Cja-019246 Callithrix jacchus 25.52 8.00e-06 43.10
IUUC-Cpo-021670 Cavia porcellus 23.08 5.00e-05 40.80
IUUC-Csa-023982 Chlorocebus sabaeus 23.08 2.00e-06 45.10
IUUC-Cin-025127 Ciona intestinalis 23.53 5.00e-05 40.40
IUUC-Cgl-026430 Colletotrichum gloeosporioides 39.62 3.00e-04 38.90
IUUC-Cne-026806 Cryptococcus neoformans 22.71 6.00e-05 40.80
IUUC-Cme-027175 Cyanidioschyzon merolae 34.43 1.00e-03 37.00
IUUC-Dno-029735 Dasypus novemcinctus 25.91 1.00e-08 52.80
IUUC-Dse-031273 Dothistroma septosporum 29.73 1.00e-05 43.90
IUUC-Dme-031933 Drosophila melanogaster 26.80 3.00e-08 51.60
IUUC-Eca-034371 Equus caballus 26.63 5.00e-11 60.50
IUUC-Fca-035576 Felis catus 32.32 1.00e-05 42.70
IUUC-Fal-037038 Ficedula albicollis 26.20 2.00e-08 52.00
IUUC-Fox-037843 Fusarium oxysporum 31.03 6.00e-07 47.80
IUUC-Fso-038272 Fusarium solani 30.30 1.00e-06 47.00
IUUC-Gga-040737 Gallus gallus 27.39 8.00e-06 43.50
IUUC-Gma-043177 Glycine max 54.11 2.00e-69 254.00
IUUC-Ggo-045206 Gorilla gorilla 27.98 3.00e-08 51.20
IUUC-Hsa-046704 Homo sapiens 28.02 3.00e-08 51.20
IUUC-Hvu-047252 Hordeum vulgare 51.52 5.00e-61 226.00
IUUC-Kpa-049181 Komagataella pastoris 25.84 8.00e-06 43.90
IUUC-Lpe-051150 Leersia perrieri 46.54 1.00e-64 238.00
IUUC-Loc-052687 Lepisosteus oculatus 24.05 2.00e-07 48.50
IUUC-Lma-053255 Leptosphaeria maculans 25.00 3.00e-05 42.70
IUUC-Laf-054270 Loxodonta africana 25.64 6.00e-08 50.40
IUUC-Mcc-054757 Macaca mulatta 23.08 2.00e-06 44.70
IUUC-Mor-057028 Magnaporthe oryzae 28.05 2.00e-06 46.20
IUUC-Mpo-057462 Magnaporthe poae 25.35 1.00e-03 37.40
IUUC-Mtr-058011 Medicago truncatula 48.79 5.00e-68 249.00
IUUC-Mla-059014 Melampsora laricipopulina 27.83 8.00e-04 37.40
IUUC-Mvi-060511 Microbotryum violaceum 22.75 5.00e-05 41.60
IUUC-Mdo-061863 Monodelphis domestica 26.73 5.00e-12 63.90
IUUC-Mmu-064413 Mus musculus 24.14 3.00e-06 44.70
IUUC-Mac-065639 Musa acuminata 55.56 1.00e-65 242.00
IUUC-Mpu-066092 Mustela putorius furo 33.33 3.00e-06 45.10
IUUC-Mlu-068198 Myotis lucifugus 25.91 4.00e-08 51.20
IUUC-Ncr-068773 Neurospora crassa 25.79 4.00e-07 48.50
IUUC-Nle-070109 Nomascus leucogenys 27.47 2.00e-07 48.50
IUUC-Ont-071575 Oreochromis niloticus 27.31 2.00e-09 55.50
IUUC-Ocu-074730 Oryctolagus cuniculus 22.93 1.00e-05 43.10
IUUC-Oba-075725 Oryza barthii 51.01 3.00e-56 210.00
IUUC-Obr-076506 Oryza brachyantha 54.59 2.00e-57 214.00
IUUC-Ogl-077564 Oryza glaberrima 50.30 7.00e-46 175.00
IUUC-Ogu-079018 Oryza glumaepatula 51.01 4.00e-56 209.00
IUUC-Oin-079792 Oryza indica 52.58 1.00e-58 218.00
IUUC-Olo-080864 Oryza longistaminata 39.22 5.00e-16 75.50
IUUC-Ome-081426 Oryza meridionalis 52.06 5.00e-58 216.00
IUUC-Oni-082286 Oryza nivara 51.52 7.00e-57 212.00
IUUC-Opu-083586 Oryza punctata 52.58 6.00e-58 216.00
IUUC-Oru-085158 Oryza rufipogon 51.52 7.00e-57 212.00
IUUC-Osa-085872 Oryza sativa 40.96 8.00e-12 61.60
IUUC-Olu-087903 Ostreococcus lucimarinus 33.93 1.00e-05 42.70
IUUC-Oga-087925 Otolemur garnettii 22.92 1.00e-04 39.70
IUUC-Ptr-091582 Pan troglodytes 28.02 3.00e-08 51.20
IUUC-Pan-092890 Papio anubis 23.08 2.00e-06 45.10
IUUC-Psi-093714 Pelodiscus sinensis 28.78 3.00e-09 54.70
IUUC-Pma-094198 Petromyzon marinus 25.66 6.00e-07 45.80
IUUC-Pno-094931 Phaeosphaeria nodorum 22.73 9.00e-06 44.30
IUUC-Ppa-095570 Physcomitrella patens 36.10 2.00e-42 164.00
IUUC-Pab-098005 Pongo abelii 27.47 5.00e-08 50.40
IUUC-Pop-099559 Populus trichocarpa 55.10 4.00e-79 286.00
IUUC-Pca-100368 Procavia capensis 30.10 7.00e-04 37.00
IUUC-Ppe-101873 Prunus persica 58.08 1.00e-76 278.00
IUUC-Pva-102951 Pteropus vampyrus 26.42 4.00e-08 50.80
IUUC-Pte-104390 Pyrenophora teres 24.31 4.00e-06 45.10
IUUC-Pyt-104633 Pyrenophora triticirepentis 23.50 2.00e-05 43.10
IUUC-Rno-105346 Rattus norvegicus 25.52 6.00e-07 47.00
IUUC-Sce-106198 Saccharomyces cerevisiae 26.19 7.00e-05 40.40
IUUC-Sha-107586 Sarcophilus harrisii 30.59 9.00e-05 38.90
IUUC-Sja-107983 Schizosaccharomyces japonicus 29.84 7.00e-11 60.10
IUUC-Spo-108327 Schizosaccharomyces pombe 25.93 7.00e-10 57.00
IUUC-Ssl-108555 Sclerotinia sclerotiorum 23.94 1.00e-01 30.80
IUUC-Smo-109438 Selaginella moellendorffii 37.25 2.00e-32 131.00
IUUC-Sit-109919 Setaria italica 49.77 9.00e-65 239.00
IUUC-Sly-111667 Solanum lycopersicum 53.75 3.00e-72 264.00
IUUC-Stu-112211 Solanum tuberosum 53.94 4.00e-73 266.00
IUUC-Sbi-113916 Sorghum bicolor 50.23 7.00e-65 239.00
IUUC-Tgu-116472 Taeniopygia guttata 26.46 3.00e-07 47.80
IUUC-Tru-117771 Takifugu rubripes 26.14 8.00e-08 49.70
IUUC-Tni-119821 Tetraodon nigroviridis 23.87 1.00e-08 52.40
IUUC-Tca-121272 Theobroma cacao 58.09 3.00e-78 284.00
IUUC-Tre-122049 Trichoderma reesei 31.40 7.00e-07 47.40
IUUC-Tvi-122642 Trichoderma virens 27.37 4.00e-07 48.10
IUUC-Tae-122969 Triticum aestivum 49.53 8.00e-63 232.00
IUUC-Tur-126346 Triticum urartu 47.89 3.00e-53 200.00
IUUC-Tme-126988 Tuber melanosporum 25.30 1.00e-08 53.10
IUUC-Tbe-127676 Tupaia belangeri 25.69 2.00e-04 38.10
IUUC-Ttr-128602 Tursiops truncatus 23.44 1.00e-07 49.30
IUUC-Vpa-130510 Vicugna pacos 24.87 3.00e-07 47.80
IUUC-Vvi-131486 Vitis vinifera 61.24 1.00e-75 275.00
IUUC-Yli-134676 Yarrowia lipolytica 28.57 3.00e-05 41.60
Created Date 25-Jun-2017

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