iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098995

Ensembl Protein ID

POPTR_0012s02520.1

UniProt Accession

B9I1Y6; B9I1Y6_POPTR

Genbank Protein ID

EEE96661.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_806281; POPTR_0012s02520g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s02520	POPTR_0012s02520.1	POPTR_0012s02520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-24	86.3	367	400

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H++ vtc++f   +d+++ sGs Dg++++W + +
   Q: 367  HSNYVTCVQFnpvDDNHFMSGSIDGKVRIWAVNS 400
           99**********766***************9866 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSLSEEEHR FFDAYEDIAS ISDAKSDSFE IFDSHSSFDN SVSISLHHEL WIKSLGSVQE 60
QRSKFFDWMG IESSGAVLRK SCFEDEFCST RSMMSCWSNG ESSLSAELGL MGNFVCREGD 120

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Nucleotide Sequence
(Fasta)

ATGGGAAGTT TGAGTGAAGA AGAACACCGA TTTTTTGATG CCTATGAAGA CATTGCATCA 60
ATTTCTGATG CAAAGTCTGA TAGCTTTGAG ATATTTGATT CTCATTCTAG TTTTGACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0012s02520g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence