iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121440

Ensembl Protein ID

EOY23695

UniProt Accession

A0A061G1K1; A0A061G1K1_THECC

Genbank Protein ID

EOY23695.1

Protein Name

Transducin/WD40 repeat-like superfamily protein, putative

Genbank Nucleotide ID

CM001881

Gene Name

TCM_015503

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_015503	EOY23695	EOY23695

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-11	44.3	347	382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.......sd..tllvsGsdDgtikvW 28
           H+++vt++++       s+   ll++Gs Dg++++W
   Q: 347  HNSWVTAISWallasdsSNpqVLLATGSSDGSVRIW 382
           9*************9983345889************ PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAWRFQAATL VASPSYPNSI AWSDENLIAV ASGHIVTILN PALPFGPRGL VTVPKSEPYP 60
IGVVKKEDLL SGCLLPTTLS REPRPCVRSI SWSNLGMAPN SGCLLAVCTT EGHVKLYCPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTTAAAAA AAAATACAAA AATCAGCTGT CCGGCGGGTT TGATCCTGGG ATCTCTATGT 60
CTGTCTCTCT CTCTCATCCT TAACGGCCCT TTCAAGGTCA CATCGTATTT CCCTCCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024761--TFIIIC_delta_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12657--TFIIIC_delta
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	47.20	9.00e-121	427.00
IUUC-Aly-005715	Arabidopsis lyrata	48.44	0.00e+00	758.00
IUUC-Ath-007637	Arabidopsis thaliana	48.76	0.00e+00	798.00
IUUC-Bdi-014902	Brachypodium distachyon	41.30	2.00e-177	615.00
IUUC-Bol-016169	Brassica oleracea	50.81	5.00e-164	570.00
IUUC-Bra-017736	Brassica rapa	49.25	0.00e+00	767.00
IUUC-Gma-043537	Glycine max	54.28	0.00e+00	642.00
IUUC-Hvu-047339	Hordeum vulgare	44.78	5.00e-06	41.20
IUUC-Mtr-058653	Medicago truncatula	49.78	0.00e+00	806.00
IUUC-Mac-065235	Musa acuminata	50.13	1.00e-99	357.00
IUUC-Ogl-077286	Oryza glaberrima	35.28	9.00e-140	490.00
IUUC-Oin-079863	Oryza indica	36.85	1.00e-159	556.00
IUUC-Oru-084242	Oryza rufipogon	40.17	1.00e-129	456.00
IUUC-Osa-085660	Oryza sativa	36.23	8.00e-155	540.00
IUUC-Ppa-095823	Physcomitrella patens	34.28	7.00e-92	330.00
IUUC-Pop-098900	Populus trichocarpa	58.49	0.00e+00	1039.00
IUUC-Ppe-101763	Prunus persica	57.53	0.00e+00	935.00
IUUC-Smo-108757	Selaginella moellendorffii	32.32	2.00e-111	396.00
IUUC-Sit-110507	Setaria italica	41.52	2.00e-177	615.00
IUUC-Sly-111401	Solanum lycopersicum	49.77	8.00e-162	563.00
IUUC-Stu-112879	Solanum tuberosum	46.52	1.00e-121	429.00
IUUC-Tae-124422	Triticum aestivum	40.81	2.00e-179	621.00
IUUC-Vvi-131537	Vitis vinifera	60.35	0.00e+00	715.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence