iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014095

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000883

Gene Name

LOC100835758; BRADI_4g29360

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G29360	BRADI4G29360.1	BRADI4G29360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.50e-27	94.8	322	393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           pe + CpI+lelM+dPv++++G+tydr+sI +w++ g +tcPvt+++l+ +dlvPn +lr +i++ + +n++
   Q: 322  PETLQCPITLELMTDPVTVSTGQTYDRASITRWIKAGCRTCPVTGERLRTTDLVPNAALRGIIERMLLSNGV 393
           8999************************************************************99888875 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MYVHFQTSLT RKFMRRPILP SILARAPGPA GSSSSPMAPR INLQPRRRRL LSLPAVCPCE 60
GIAPEPLLAS LVSLAADVAS RRGASGDFPV LRRGARQAVR IAGLLLAFLE ELTPTAAVPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTACCAT CCGAGAAACC ACGCTCTCAC TACCTACGAA TAATGTACTC TGCGGATGTA 60
CGTCCACTTC CAAACCTCTC TTACTCGTAA ATTTATGCGC CGGCCAATAC TCCCGTCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100835758

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	74.85	0.00e+00	661.00
IUUC-Atr-002640	Amborella trichopoda	34.91	1.00e-85	310.00
IUUC-Aly-006337	Arabidopsis lyrata	35.44	6.00e-104	370.00
IUUC-Ath-007598	Arabidopsis thaliana	35.00	1.00e-102	366.00
IUUC-Bol-015964	Brassica oleracea	36.02	1.00e-103	370.00
IUUC-Bra-017789	Brassica rapa	35.68	2.00e-96	346.00
IUUC-Gma-043679	Glycine max	37.72	2.00e-121	429.00
IUUC-Hvu-047204	Hordeum vulgare	76.97	0.00e+00	939.00
IUUC-Lpe-051010	Leersia perrieri	67.90	0.00e+00	676.00
IUUC-Mtr-058794	Medicago truncatula	38.30	8.00e-117	414.00
IUUC-Obr-076695	Oryza brachyantha	70.60	3.00e-144	504.00
IUUC-Ogl-076995	Oryza glaberrima	68.69	0.00e+00	687.00
IUUC-Oin-079752	Oryza indica	69.24	0.00e+00	697.00
IUUC-Ome-081268	Oryza meridionalis	67.33	0.00e+00	701.00
IUUC-Oni-082928	Oryza nivara	69.11	0.00e+00	687.00
IUUC-Opu-084107	Oryza punctata	69.40	0.00e+00	728.00
IUUC-Oru-084651	Oryza rufipogon	68.95	0.00e+00	688.00
IUUC-Osa-085940	Oryza sativa	68.95	0.00e+00	688.00
IUUC-Pop-099290	Populus trichocarpa	38.86	3.00e-125	441.00
IUUC-Ppe-102097	Prunus persica	39.64	4.00e-123	434.00
IUUC-Sit-110113	Setaria italica	73.49	0.00e+00	852.00
IUUC-Sly-111836	Solanum lycopersicum	37.17	3.00e-122	431.00
IUUC-Stu-112861	Solanum tuberosum	37.46	5.00e-124	437.00
IUUC-Sbi-114188	Sorghum bicolor	70.29	0.00e+00	832.00
IUUC-Tca-121206	Theobroma cacao	40.32	6.00e-142	497.00
IUUC-Tae-125504	Triticum aestivum	76.78	0.00e+00	929.00
IUUC-Tur-126514	Triticum urartu	70.69	0.00e+00	752.00
IUUC-Vvi-130884	Vitis vinifera	41.10	5.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence