iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099720

Ensembl Protein ID

POPTR_0012s08920.1

UniProt Accession

B9I3G2; B9I3G2_POPTR

Genbank Protein ID

EEE96298.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_570146; POPTR_0012s08920g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s08920	POPTR_0012s08920.1	POPTR_0012s08920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-08	33.6	50	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf..sdtllvsGsdDgtikvWDlrtgv 34
           +++f  +  l+ +GsdD++  +WDlr+++
   Q: 50   SFDFhqP-QLVYTGSDDCKFSCWDLRDDP 77
           5566644.899***************986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MCLCLDWNPS ATSISVGLSD SSVSIVSFSE SQLDVIQEWE AHEFELWAAS FDFHQPQLVY 60
TGSDDCKFSC WDLRDDPSNL VFQNYKIHKM DICYIAKNPS DPNILLTRSY DEYLRLWDVR 120

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Nucleotide Sequence
(Fasta)

TTGTTAATTC TTGATGGAGG GGACTCTCTA TCTCTAAGAG GGATAGATGG TGAAAAAATA 60
AGCTCCTCAA TGTGTCTTTG TTTGGACTGG AACCCATCAG CCACATCAAT CTCAGTGGGG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

pop:POPTR_0012s08920g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence