iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099969

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_1095652; POPTR_0012s10930g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s10930	POPTR_0012s10930.1	POPTR_0012s10930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-22	79.7	250	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf........sd.tllvsGsdDgtikvWDlr 31
           H+++v ++          +d  ll+s+s Dg+i+vWD+r
   Q: 250  HSARVKGIVVlmrndstvDDpYLLASASSDGVIRVWDVR 288
           788888875457877776666679*************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSLIAGSYEK FIWGFKLKTL KHEPSSQNLT LTPLFSYQSH LAHITSAAAA GPAAASGSAD 60
DTIHLYDLPS ASSLGSLHQH TSSVTSVTFF TPPSLSFPRN LLSASADGSV CIFDTDPFVH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAGAGAGAC CCTTTGCCTG GAAAAACCCT AATTTTCAGT CTTGTTGTAT TTGTAGGGTT 60
TTGGCAGAAT CACCAGACCC TCTAGCAAGC AAACAGAAGA ACAATGAGTC TAATAGCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus

KEGG

pop:POPTR_0012s10930g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000839	Aegilops tauschii	60.74	5.00e-41	159.00
IUUC-Aml-001803	Ailuropoda melanoleuca	31.23	6.00e-41	160.00
IUUC-Atr-003018	Amborella trichopoda	48.43	3.00e-84	305.00
IUUC-Apl-004199	Anas platyrhynchos	34.62	3.00e-43	168.00
IUUC-Aca-005157	Anolis carolinensis	34.29	1.00e-39	156.00
IUUC-Aly-006245	Arabidopsis lyrata	70.91	5.00e-130	456.00
IUUC-Ath-007309	Arabidopsis thaliana	68.90	6.00e-131	459.00
IUUC-Ago-007878	Ashbya gossypii	26.47	5.00e-17	81.60
IUUC-Ani-009358	Aspergillus nidulans	22.47	1.00e-09	57.80
IUUC-Ame-011121	Astyanax mexicanus	34.40	8.00e-47	180.00
IUUC-Bta-012383	Bos taurus	30.91	1.00e-38	153.00
IUUC-Bdi-014505	Brachypodium distachyon	52.17	3.00e-65	241.00
IUUC-Bol-015458	Brassica oleracea	70.00	5.00e-130	456.00
IUUC-Bra-017790	Brassica rapa	69.70	3.00e-129	453.00
IUUC-Cja-018803	Callithrix jacchus	31.23	2.00e-37	149.00
IUUC-Cfa-020178	Canis familiaris	32.29	4.00e-43	168.00
IUUC-Cpo-021785	Cavia porcellus	32.37	3.00e-42	165.00
IUUC-Cre-022703	Chlamydomonas reinhardtii	35.62	2.00e-41	163.00
IUUC-Csa-023179	Chlorocebus sabaeus	32.49	3.00e-44	171.00
IUUC-Cho-025088	Choloepus hoffmanni	34.74	3.00e-33	135.00
IUUC-Cin-025484	Ciona intestinalis	24.43	5.00e-10	57.40
IUUC-Csv-025887	Ciona savignyi	30.09	5.00e-29	121.00
IUUC-Cgl-026525	Colletotrichum gloeosporioides	24.92	1.00e-09	57.00
IUUC-Cne-027021	Cryptococcus neoformans	37.11	8.00e-22	99.40
IUUC-Dre-027360	Danio rerio	33.76	5.00e-48	184.00
IUUC-Dno-029836	Dasypus novemcinctus	33.33	2.00e-46	179.00
IUUC-Dor-030677	Dipodomys ordii	30.48	2.00e-36	145.00
IUUC-Dme-032004	Drosophila melanogaster	29.45	3.00e-17	82.40
IUUC-Ete-032837	Echinops telfairi	31.01	7.00e-37	146.00
IUUC-Eca-033291	Equus caballus	32.38	8.00e-42	163.00
IUUC-Eeu-035347	Erinaceus europaeus	31.74	5.00e-36	144.00
IUUC-Fca-036577	Felis catus	30.38	3.00e-41	162.00
IUUC-Fal-036810	Ficedula albicollis	30.99	3.00e-39	155.00
IUUC-Gmo-038537	Gadus morhua	31.77	2.00e-36	145.00
IUUC-Gga-040566	Gallus gallus	33.97	1.00e-44	172.00
IUUC-Gac-042422	Gasterosteus aculeatus	33.76	1.00e-41	163.00
IUUC-Gma-044006	Glycine max	64.33	3.00e-117	414.00
IUUC-Ggo-045365	Gorilla gorilla	27.86	2.00e-28	119.00
IUUC-Hsa-046121	Homo sapiens	32.38	5.00e-44	171.00
IUUC-Hvu-047592	Hordeum vulgare	59.15	4.00e-49	186.00
IUUC-Itr-048361	Ictidomys tridecemlineatus	31.58	2.00e-38	152.00
IUUC-Kpa-049407	Komagataella pastoris	29.94	2.00e-28	119.00
IUUC-Lch-049767	Latimeria chalumnae	30.65	2.00e-42	165.00
IUUC-Lpe-051569	Leersia perrieri	49.69	7.00e-63	233.00
IUUC-Loc-051940	Lepisosteus oculatus	33.44	3.00e-42	165.00
IUUC-Laf-054463	Loxodonta africana	31.43	3.00e-41	161.00
IUUC-Mcc-055412	Macaca mulatta	32.18	9.00e-44	170.00
IUUC-Mtr-057886	Medicago truncatula	65.02	4.00e-115	407.00
IUUC-Mga-060109	Meleagris gallopavo	34.49	3.00e-42	165.00
IUUC-Mvi-060326	Microbotryum violaceum	27.62	2.00e-17	83.60
IUUC-Mmr-060681	Microcebus murinus	31.23	3.00e-42	165.00
IUUC-Mdo-063004	Monodelphis domestica	34.29	3.00e-45	175.00
IUUC-Mmu-064184	Mus musculus	34.39	1.00e-41	162.00
IUUC-Mac-064987	Musa acuminata	61.06	3.00e-105	374.00
IUUC-Mpu-065847	Mustela putorius furo	31.53	2.00e-41	162.00
IUUC-Mlu-067608	Myotis lucifugus	32.70	6.00e-41	160.00
IUUC-Nle-069302	Nomascus leucogenys	32.06	2.00e-43	169.00
IUUC-Ont-072591	Oreochromis niloticus	33.65	2.00e-38	152.00
IUUC-Oan-073558	Ornithorhynchus anatinus	32.64	5.00e-32	130.00
IUUC-Ocu-074558	Oryctolagus cuniculus	31.73	8.00e-37	147.00
IUUC-Obr-076509	Oryza brachyantha	56.20	2.00e-41	160.00
IUUC-Ogl-076960	Oryza glaberrima	52.29	9.00e-74	269.00
IUUC-Ogu-078660	Oryza glumaepatula	50.76	5.00e-67	247.00
IUUC-Oin-079790	Oryza indica	53.21	6.00e-78	283.00
IUUC-Ome-081631	Oryza meridionalis	48.97	2.00e-52	199.00
IUUC-Oni-083082	Oryza nivara	52.91	5.00e-75	273.00
IUUC-Opu-083394	Oryza punctata	54.46	1.00e-82	299.00
IUUC-Oru-084461	Oryza rufipogon	50.90	8.00e-72	263.00
IUUC-Osa-085655	Oryza sativa	55.31	2.00e-65	241.00
IUUC-Ola-086955	Oryzias latipes	34.94	1.00e-46	179.00
IUUC-Olu-087657	Ostreococcus lucimarinus	31.71	9.00e-31	127.00
IUUC-Oga-088108	Otolemur garnettii	31.86	1.00e-42	166.00
IUUC-Oar-090019	Ovis aries	31.43	5.00e-39	154.00
IUUC-Ptr-091544	Pan troglodytes	32.38	4.00e-44	171.00
IUUC-Pan-092562	Papio anubis	32.18	7.00e-44	170.00
IUUC-Psi-094025	Pelodiscus sinensis	36.78	1.00e-32	133.00
IUUC-Pma-094322	Petromyzon marinus	35.96	4.00e-38	150.00
IUUC-Pno-095112	Phaeosphaeria nodorum	22.14	2.00e-07	49.70
IUUC-Ppa-095541	Physcomitrella patens	41.98	3.00e-62	231.00
IUUC-Pfo-096667	Poecilia formosa	34.62	8.00e-34	137.00
IUUC-Pab-098064	Pongo abelii	32.38	9.00e-44	170.00
IUUC-Pca-101053	Procavia capensis	33.23	3.00e-42	164.00
IUUC-Ppe-101839	Prunus persica	72.40	8.00e-136	475.00
IUUC-Pva-102963	Pteropus vampyrus	31.75	3.00e-37	148.00
IUUC-Rno-105975	Rattus norvegicus	32.37	2.00e-40	159.00
IUUC-Sce-106226	Saccharomyces cerevisiae	26.55	2.00e-16	80.10
IUUC-Sha-106907	Sarcophilus harrisii	32.27	1.00e-43	169.00
IUUC-Sja-107867	Schizosaccharomyces japonicus	25.61	3.00e-13	68.90
IUUC-Spo-108377	Schizosaccharomyces pombe	25.71	1.00e-12	66.60
IUUC-Smo-109068	Selaginella moellendorffii	39.70	6.00e-57	213.00
IUUC-Sit-110114	Setaria italica	52.01	8.00e-71	259.00
IUUC-Sly-111581	Solanum lycopersicum	68.71	1.00e-116	412.00
IUUC-Stu-112770	Solanum tuberosum	67.79	6.00e-116	409.00
IUUC-Sbi-114797	Sorghum bicolor	50.91	3.00e-64	238.00
IUUC-Sre-114941	Sporisorium reilianum	27.49	2.00e-25	109.00
IUUC-Ssc-116346	Sus scrofa	31.11	1.00e-40	160.00
IUUC-Tgu-116628	Taeniopygia guttata	34.29	8.00e-43	167.00
IUUC-Tru-117646	Takifugu rubripes	34.82	6.00e-42	164.00
IUUC-Tsy-119593	Tarsius syrichta	30.52	4.00e-25	108.00
IUUC-Tni-119872	Tetraodon nigroviridis	34.19	1.00e-44	172.00
IUUC-Tca-121500	Theobroma cacao	71.73	6.00e-134	469.00
IUUC-Tae-124450	Triticum aestivum	52.01	3.00e-68	251.00
IUUC-Tur-126015	Triticum urartu	61.24	2.00e-40	157.00
IUUC-Tbe-127959	Tupaia belangeri	31.91	4.00e-35	140.00
IUUC-Ttr-129125	Tursiops truncatus	31.75	2.00e-40	159.00
IUUC-Uma-129567	Ustilago maydis	29.84	8.00e-24	104.00
IUUC-Vpa-130157	Vicugna pacos	36.90	3.00e-24	105.00
IUUC-Vvi-131065	Vitis vinifera	74.70	4.00e-121	426.00
IUUC-Xtr-132601	Xenopus tropicalis	30.57	1.00e-32	133.00
IUUC-Xma-133142	Xiphophorus maculatus	34.62	4.00e-40	157.00
IUUC-Yli-134580	Yarrowia lipolytica	24.85	1.00e-14	73.90
IUUC-Zma-135330	Zea mays	51.38	3.00e-75	274.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence