iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099459

Ensembl Protein ID

POPTR_0013s08030.1

UniProt Accession

U5FRI2; U5FRI2_POPTR

Genbank Protein ID

ERP53813.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_596940; POPTR_0013s08030g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s08030	POPTR_0013s08030.1	POPTR_0013s08030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-09	38.1	453	484

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWD 29
           H ++v+++af  ++  l +v+++dD+ ikvWD
   Q: 453  HVGGVNDIAFahPNkQLcIVTCGDDKMIKVWD 484
           99*********97653359************* PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKH FEDQVQAGEW DEIERYLCGF 60
TKVEDNRYSM KIFFEIRKQK YLEALDRQDR AKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCCCAAGCG AGCGAGCAGA GAGAATGCTA GTGCCAGAGC GCAAGAGAGA GTGAGTGAAG 60
GTTGTTGCTG GTGCCAGTGC CAGAGCGCAA GAGAAAGAAA TAAATAAGAA AACCCTCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

pop:POPTR_0013s08030g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence