iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098960

Ensembl Protein ID

POPTR_0013s13170.1

UniProt Accession

U5FSR3; U5FSR3_POPTR

Genbank Protein ID

ERP54248.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTR_0013s13170g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s13170	POPTR_0013s13170.1	POPTR_0013s13170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-12	48.9	159	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH+d +t++++ +d  +l+  + D+++ +WD+r
   Q: 159  GHQDMITGMQLsPDgSYLLMNGMDNKLCIWDMR 191
           89**********999****************86 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQVVPREGES ALSVSGPRPM EWSTVLYAGP QGPGKNGKQH KSSLESPIML LTDGNVIASG 60
SHDKEIFLWY IHGECKNFMV MRGHKNAVLD LHWTTDGSQI ISASPDKIVR GAIQTFPDKY 120

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Nucleotide Sequence
(Fasta)

AAGTCAAGAT GCAAGTTGTT CCTAGAGAGG GTGAAAGTGC TTTGTCCGTC TCTGGTCCAA 60
GGCCAATGGA GTGGTCTACT GTTCTATATG CAGGGCCACA AGGACCTGGA AAAAATGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0013s13170g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence