iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005425

UUCD1 version

UUC-ArL-01067

Ensembl Protein ID

fgenesh1_pg.C_scaffold_8002298

UniProt Accession

D7MND7; D7MND7_ARALL

Genbank Protein ID

EFH41090.1

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_358511

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_8002298	fgenesh1_pg.C_scaffold_8002298	fgenesh1_pg.C_scaffold_8002298

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-14	54.2	211	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           Ht +v+c++   sd   + +Gs+D t++vWD+r+
   Q: 211  HTMGVCCISPnpSDpYSIFTGSYDETLRVWDTRS 244
           8889*******888677**************875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDAAHCYLEG NADAVEFCPH EPYANLLAAS TYTLQEGDCP SRSGSVYLFD VGDVEDVSLN 60
LIQKIDTAGV FDIRWSRGGD GGGSVALAQA DADGCLRVYK IDETELKGCS LREVSGEKIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCAG CACATTGCTA TCTCGAAGGA AACGCCGACG CTGTAGAATT TTGTCCTCAC 60
GAGCCTTACG CTAACTTGCT TGCAGCTTCT ACTTACACAC TCCAAGAAGG AGATTGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_358511

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000566	Aegilops tauschii	56.36	1.00e-75	274.00
IUUC-Aml-001799	Ailuropoda melanoleuca	33.93	3.00e-39	155.00
IUUC-Atr-002540	Amborella trichopoda	52.91	1.00e-72	265.00
IUUC-Apl-003582	Anas platyrhynchos	34.84	3.00e-41	162.00
IUUC-Aca-004275	Anolis carolinensis	39.26	2.00e-41	162.00
IUUC-Ath-007434	Arabidopsis thaliana	93.82	0.00e+00	648.00
IUUC-Ago-007782	Ashbya gossypii	34.65	5.00e-24	104.00
IUUC-Ang-009512	Aspergillus niger	23.94	2.00e-09	56.20
IUUC-Ame-011276	Astyanax mexicanus	43.29	4.00e-36	144.00
IUUC-Bta-012985	Bos taurus	32.64	7.00e-38	150.00
IUUC-Bdi-014568	Brachypodium distachyon	52.57	1.00e-93	335.00
IUUC-Bol-016236	Brassica oleracea	86.26	9.00e-177	611.00
IUUC-Bra-017012	Brassica rapa	85.38	6.00e-169	585.00
IUUC-Cel-018435	Caenorhabditis elegans	28.25	1.00e-12	66.60
IUUC-Cja-018952	Callithrix jacchus	34.12	8.00e-42	164.00
IUUC-Cfa-021210	Canis familiaris	34.04	5.00e-39	154.00
IUUC-Cpo-022017	Cavia porcellus	35.78	1.00e-42	166.00
IUUC-Cre-022584	Chlamydomonas reinhardtii	45.26	1.00e-32	132.00
IUUC-Csa-023897	Chlorocebus sabaeus	35.66	9.00e-42	163.00
IUUC-Cho-024708	Choloepus hoffmanni	45.45	1.00e-20	92.40
IUUC-Cin-025485	Ciona intestinalis	33.14	4.00e-51	194.00
IUUC-Cne-026845	Cryptococcus neoformans	33.05	2.00e-47	181.00
IUUC-Cme-027194	Cyanidioschyzon merolae	28.03	6.00e-20	90.90
IUUC-Dre-028581	Danio rerio	38.37	7.00e-48	184.00
IUUC-Dno-029285	Dasypus novemcinctus	34.86	4.00e-44	171.00
IUUC-Dor-030566	Dipodomys ordii	32.85	3.00e-43	168.00
IUUC-Dme-031714	Drosophila melanogaster	34.10	6.00e-46	177.00
IUUC-Ete-032317	Echinops telfairi	28.94	8.00e-32	130.00
IUUC-Eca-033341	Equus caballus	43.61	2.00e-22	97.10
IUUC-Eeu-034890	Erinaceus europaeus	31.74	5.00e-39	154.00
IUUC-Fca-035966	Felis catus	33.93	3.00e-40	159.00
IUUC-Fal-037338	Ficedula albicollis	34.55	1.00e-44	173.00
IUUC-Gmo-039487	Gadus morhua	38.75	2.00e-51	195.00
IUUC-Gga-040691	Gallus gallus	34.15	1.00e-43	170.00
IUUC-Gac-041912	Gasterosteus aculeatus	39.04	2.00e-51	195.00
IUUC-Gma-043166	Glycine max	61.03	8.00e-125	439.00
IUUC-Ggo-045003	Gorilla gorilla	34.33	3.00e-44	171.00
IUUC-Hsa-046840	Homo sapiens	34.63	2.00e-45	176.00
IUUC-Hvu-047291	Hordeum vulgare	52.27	1.00e-101	362.00
IUUC-Itr-048072	Ictidomys tridecemlineatus	34.94	9.00e-39	154.00
IUUC-Kpa-049296	Komagataella pastoris	26.96	5.00e-24	104.00
IUUC-Lch-049627	Latimeria chalumnae	37.95	1.00e-53	203.00
IUUC-Lpe-051462	Leersia perrieri	55.68	3.00e-99	354.00
IUUC-Loc-052917	Lepisosteus oculatus	37.73	1.00e-51	196.00
IUUC-Laf-054268	Loxodonta africana	32.12	4.00e-43	168.00
IUUC-Mcc-055309	Macaca mulatta	34.63	1.00e-44	173.00
IUUC-Meu-055985	Macropus eugenii	36.24	3.00e-45	174.00
IUUC-Mtr-058767	Medicago truncatula	61.81	2.00e-126	445.00
IUUC-Mla-059032	Melampsora laricipopulina	31.56	2.00e-41	162.00
IUUC-Mga-059799	Meleagris gallopavo	37.68	2.00e-33	135.00
IUUC-Mvi-060258	Microbotryum violaceum	31.43	7.00e-37	147.00
IUUC-Mmr-061425	Microcebus murinus	33.03	2.00e-42	165.00
IUUC-Mdo-062620	Monodelphis domestica	37.01	7.00e-51	194.00
IUUC-Mmu-063473	Mus musculus	34.76	8.00e-45	174.00
IUUC-Mac-065376	Musa acuminata	56.81	2.00e-114	404.00
IUUC-Mpu-066124	Mustela putorius furo	33.23	2.00e-40	159.00
IUUC-Mlu-067844	Myotis lucifugus	35.37	1.00e-43	170.00
IUUC-Ont-071523	Oreochromis niloticus	39.22	4.00e-58	218.00
IUUC-Oan-072754	Ornithorhynchus anatinus	31.91	1.00e-29	123.00
IUUC-Ocu-074659	Oryctolagus cuniculus	40.24	2.00e-30	125.00
IUUC-Oba-075786	Oryza barthii	59.55	7.00e-70	255.00
IUUC-Obr-076077	Oryza brachyantha	54.65	6.00e-97	346.00
IUUC-Ogl-077449	Oryza glaberrima	55.30	6.00e-99	353.00
IUUC-Ogu-078217	Oryza glumaepatula	55.30	1.00e-98	352.00
IUUC-Oin-079292	Oryza indica	55.30	7.00e-99	353.00
IUUC-Olo-080599	Oryza longistaminata	56.52	3.00e-74	270.00
IUUC-Ome-081740	Oryza meridionalis	54.19	7.00e-96	343.00
IUUC-Oni-082582	Oryza nivara	55.30	7.00e-99	353.00
IUUC-Opu-083166	Oryza punctata	53.41	3.00e-95	341.00
IUUC-Oru-084514	Oryza rufipogon	53.52	5.00e-87	314.00
IUUC-Osa-086226	Oryza sativa	55.30	7.00e-99	353.00
IUUC-Olu-087798	Ostreococcus lucimarinus	40.55	1.00e-36	145.00
IUUC-Oga-088820	Otolemur garnettii	32.54	6.00e-41	160.00
IUUC-Oar-089825	Ovis aries	31.03	3.00e-30	125.00
IUUC-Pan-091766	Papio anubis	34.33	5.00e-39	154.00
IUUC-Psi-093167	Pelodiscus sinensis	35.44	1.00e-49	189.00
IUUC-Pno-095089	Phaeosphaeria nodorum	25.98	9.00e-22	97.10
IUUC-Ppa-095299	Physcomitrella patens	45.89	2.00e-81	295.00
IUUC-Pfo-096456	Poecilia formosa	39.63	1.00e-57	216.00
IUUC-Pab-097864	Pongo abelii	43.20	2.00e-33	135.00
IUUC-Pop-100043	Populus trichocarpa	64.60	1.00e-99	355.00
IUUC-Ppe-101556	Prunus persica	64.08	7.00e-132	462.00
IUUC-Pva-102281	Pteropus vampyrus	34.15	2.00e-39	155.00
IUUC-Pgr-103459	Puccinia graminis	33.73	6.00e-29	120.00
IUUC-Rno-105659	Rattus norvegicus	35.06	3.00e-44	172.00
IUUC-Sha-107077	Sarcophilus harrisii	34.23	1.00e-43	170.00
IUUC-Smo-108959	Selaginella moellendorffii	45.53	3.00e-75	274.00
IUUC-Sit-109789	Setaria italica	49.71	8.00e-85	306.00
IUUC-Sly-110953	Solanum lycopersicum	66.98	2.00e-92	330.00
IUUC-Stu-112698	Solanum tuberosum	64.22	8.00e-133	465.00
IUUC-Sbi-114197	Sorghum bicolor	53.56	2.00e-97	348.00
IUUC-Sre-115167	Sporisorium reilianum	35.60	2.00e-29	122.00
IUUC-Tgu-116657	Taeniopygia guttata	37.56	5.00e-33	133.00
IUUC-Tru-118578	Takifugu rubripes	35.69	2.00e-54	206.00
IUUC-Tca-121611	Theobroma cacao	65.23	2.00e-130	457.00
IUUC-Tae-123970	Triticum aestivum	50.71	5.00e-99	353.00
IUUC-Tur-126298	Triticum urartu	55.45	4.00e-74	270.00
IUUC-Ttr-128302	Tursiops truncatus	31.02	4.00e-31	127.00
IUUC-Uma-129644	Ustilago maydis	40.00	8.00e-34	137.00
IUUC-Vvi-131363	Vitis vinifera	62.93	5.00e-118	416.00
IUUC-Xtr-132976	Xenopus tropicalis	33.64	8.00e-45	174.00
IUUC-Xma-133286	Xiphophorus maculatus	39.01	1.00e-55	209.00
IUUC-Yli-134664	Yarrowia lipolytica	30.00	9.00e-29	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence