iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131140

UUCD1 version

UUC-ViV-00488

Ensembl Protein ID

VIT_18s0001g11600.t01

UniProt Accession

F6H024; F6H024_VITVI

Genbank Protein ID

CCB45901.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595227

Gene Name

VIT_18s0001g11600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g11600	VIT_18s0001g11600.t01	VIT_18s0001g11600.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-32	108.7	204	241
UBD/Beta-Prp	1.10e-54	186.2	204	418

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d ++cl++  + +ll s+s+D t kvW++++ ++l 
   Q: 204  HSDAISCLSLnEEqGLLYSASWDRTFKVWRISDSKCLE 241
           9*********63379****************9999986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dls....tgkcvhtl 90
           h++ i+c+   +++ ll ++s+d+t kvw++++ k+l+s+s h+++v++v  s++g +  tgs D+ +kvw  +l     +   v+tl
   Q: 204  HSDAISCLSLNEEQGLLYSASWDRTFKVWRISDSKCLESISAHDDAVNSVVASSEG-MVFTGSADGSVKVWrrELHgkgtKHAFVQTL 290
           8899***************************************************9.9*************66444777688899999 PP
   S: 91   kghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtlt 176
            ++e  v++l ++ sg+++  Gs+d  ++ w+ e++     +l+gh+ +v c++     nl++sGs+D+t+ +W+      ++l  lt
   Q: 291  LKQECAVTALCVNTSGSVVYCGSSDGLVNFWEREKQLSHGGVLRGHKVAVLCLAAAA--NLVFSGSADKTICVWRRegVVHTCLSVLT 376
           9******************************6666555555******9999999988..***************9977789999999* PP
   S: 177  gghtdsvyslsfdsng........kelvsgsldgtvklwdlqt 211
           g ht++v++l++ +++          + sgsld++vk+w+++ 
   Q: 377  G-HTGPVKCLAVGEDKestaknqrWVVYSGSLDKSVKVWSVSD 418
           9.*********444444455554566779***********983 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MLEETNSIPR PKYRNIMHSD PNLSSSIPTE DDYPIRNSSA SAASPGFYDN RLSGEGSPMT 60
MSPWNQTSSE AKSSWSRFEE NLPQNGLIGS LTREEGHIYS LAATGELLYT GSDSKNIRVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACCGTACA ATGCTAACAG CTAATTTTCC AACATTAAAA ACAATAGCTT AAATATAAGT 60
GTCGGATCCG GATTCTCTGG CCTCCCACGA GATATCTTTG TACCTAATCA TAACGTTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0009846--P:pollen germination

KEGG

vvi:100262588

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006909	Arabidopsis thaliana	74.12	0.00e+00	640.00
IUUC-Bdi-014024	Brachypodium distachyon	62.89	4.00e-142	497.00
IUUC-Bra-017125	Brassica rapa	75.06	2.00e-179	620.00
IUUC-Gma-043481	Glycine max	70.73	2.00e-171	594.00
IUUC-Hvu-047445	Hordeum vulgare	63.01	2.00e-138	484.00
IUUC-Mtr-057641	Medicago truncatula	70.78	1.00e-169	588.00
IUUC-Mac-065282	Musa acuminata	61.67	2.00e-119	421.00
IUUC-Oba-075783	Oryza barthii	60.87	5.00e-140	489.00
IUUC-Obr-076198	Oryza brachyantha	61.92	5.00e-138	483.00
IUUC-Ogl-077280	Oryza glaberrima	60.87	5.00e-140	489.00
IUUC-Oin-079931	Oryza indica	60.87	5.00e-140	490.00
IUUC-Olo-080744	Oryza longistaminata	63.64	1.00e-117	415.00
IUUC-Oni-082948	Oryza nivara	60.87	5.00e-140	490.00
IUUC-Opu-083881	Oryza punctata	62.19	4.00e-140	490.00
IUUC-Oru-084999	Oryza rufipogon	60.87	5.00e-140	490.00
IUUC-Osa-085749	Oryza sativa	60.87	5.00e-140	490.00
IUUC-Pop-099113	Populus trichocarpa	77.62	0.00e+00	628.00
IUUC-Ppe-101858	Prunus persica	74.36	0.00e+00	625.00
IUUC-Sit-109859	Setaria italica	63.66	5.00e-132	463.00
IUUC-Sly-111340	Solanum lycopersicum	70.00	8.00e-163	565.00
IUUC-Stu-112301	Solanum tuberosum	69.70	1.00e-160	558.00
IUUC-Sbi-114260	Sorghum bicolor	62.70	1.00e-139	488.00
IUUC-Tca-121208	Theobroma cacao	78.33	0.00e+00	655.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence