iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-001181

Ensembl Protein ID

EMT10471

UniProt Accession

M8B8Y2; M8B8Y2_AEGTA

Genbank Protein ID

EMT10471.1

Protein Name

RING-H2 finger protein ATL3F

Genbank Nucleotide ID

KD558566

Gene Name

F775_13077

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_13077	EMT10471	EMT10471

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.10e-08	33.8	176	218

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++++   ++++p C H fh++C+  w        k+ +CP+Cr
   Q: 176  CSICLGEYDEKeiLRIMPtCRHNFHLSCIDIW------LEKQTTCPICR 218
           ********6655588899**************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MLGSGLNLVT TVIGFGMSAT FIVFVCARLI CGRAVRADAE ADVAAARAMA PGPAPFDFDI 60
EFRTADLDRT PIDVGVEPHP MEIGVRMCCC QPTKFAIETV GWYWRTTRKN FDTSLSYIRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGGGGT CCGGGCTGAA TCTGGTGACC ACGGTGATCG GCTTCGGGAT GAGCGCCACC 60
TTCATCGTCT TCGTCTGCGC ACGCCTCATC TGCGGACGCG CCGTGCGGGC CGACGCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_13077

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014570	Brachypodium distachyon	87.20	4.00e-65	239.00
IUUC-Lpe-051361	Leersia perrieri	81.89	8.00e-54	202.00
IUUC-Mac-065266	Musa acuminata	51.45	1.00e-35	141.00
IUUC-Oba-075171	Oryza barthii	84.00	8.00e-60	222.00
IUUC-Obr-076241	Oryza brachyantha	84.80	3.00e-61	227.00
IUUC-Ogu-078077	Oryza glumaepatula	84.00	3.00e-60	223.00
IUUC-Oin-079905	Oryza indica	84.00	3.00e-60	223.00
IUUC-Olo-080910	Oryza longistaminata	81.65	1.00e-49	187.00
IUUC-Ome-081424	Oryza meridionalis	83.20	4.00e-60	223.00
IUUC-Oni-082602	Oryza nivara	84.00	3.00e-60	223.00
IUUC-Opu-083909	Oryza punctata	84.80	1.00e-60	224.00
IUUC-Oru-084703	Oryza rufipogon	84.00	3.00e-60	223.00
IUUC-Osa-085851	Oryza sativa	84.00	3.00e-60	223.00
IUUC-Pop-099783	Populus trichocarpa	53.39	3.00e-33	134.00
IUUC-Sit-110325	Setaria italica	79.37	1.00e-58	218.00
IUUC-Sbi-113868	Sorghum bicolor	50.00	7.00e-18	83.20
IUUC-Tca-120974	Theobroma cacao	58.82	9.00e-36	142.00
IUUC-Tae-124617	Triticum aestivum	100.00	9.00e-72	261.00
IUUC-Tur-126700	Triticum urartu	86.62	6.00e-118	415.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence