iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099673

Ensembl Protein ID

POPTR_0014s13250.1

UniProt Accession

B9I9Z9; B9I9Z9_POPTR

Genbank Protein ID

EEE99363.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_572785; POPTR_0014s13250g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s13250	POPTR_0014s13250.1	POPTR_0014s13250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-07	31.5	33	63

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           Ht  v+++a+ ++ +ll++ s D t   W++
   Q: 33   HTRTVRSCAWsPSgKLLATPSFDDTTATWEI 63
           9**********666*********99998885 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDLCNGDMEL KEIQTLEGHT DRIFMIRQFW KKHTRTVRSC AWSPSGKLLA TPSFDDTTAT 60
WEINGGDFEC VAALEGHENE VKSVPWNASG SLLQTCGRDK TVWIWEVMPG NESECVSVFP 120

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Nucleotide Sequence
(Fasta)

ATGGATTTGT GCAATGGCGA TATGGAGCTG AAGGAGATTC AAACACTTGA AGGGCACACC 60
GATAGGGTTT GCAGCTTAGT TTGGAATCCA GCCACCGGAA CTTCTAATAT TCCTCCTGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097361--C:CIA complex
GO:0016226--P:iron-sulfur cluster assembly

KEGG

pop:POPTR_0014s13250g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence