iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057786

Ensembl Protein ID

AES72472

UniProt Accession

G7J6U0; G7J6U0_MEDTR

Genbank Protein ID

AES72472.1

Protein Name

RING-H2 finger ATL21B-like protein, putative

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g091200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g091200	AES72472	AES72472

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	32.7	331	373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++  k+ ++++p C H+fha+C+  w         +++CP+Cr
   Q: 331  CPICLSEYmpKETVKTMPeCEHCFHAQCIDEW------LPLNASCPICR 373
           ******998866699999**************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MKTPNPKLIL ICFLFLFNLN QTQVMSLATI ETCLDTVCHM NEPLIRFPFH IEEKQTNTCG 60
YPGFKVLCNE SEKNQTLLNL PYMENLSIQK INYAKQELFV NDPNNCLPKQ LLSLNLSTSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTCAATAT TTGATTATGA TTCCTTAACA AATGACATGA AAAATTTATT GATGAGAATA 60
GCATCGGTGC AAGATACATA TTGAATATCA TTACTTTATC AATTTGAAAG TATACTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032872--WAK_assoc_C
IPR025287--WAK_GUB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13947--GUB_WAK_bind
PF14380--WAK_assoc
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030247--F:polysaccharide binding
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g091200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006768	Arabidopsis thaliana	47.86	9.00e-85	306.00
IUUC-Bol-016427	Brassica oleracea	47.58	2.00e-86	311.00
IUUC-Bra-017394	Brassica rapa	47.97	8.00e-84	303.00
IUUC-Gma-043445	Glycine max	67.96	7.00e-146	509.00
IUUC-Pop-099589	Populus trichocarpa	47.67	1.00e-93	336.00
IUUC-Ppe-101955	Prunus persica	49.43	3.00e-80	291.00
IUUC-Sly-111586	Solanum lycopersicum	48.00	2.00e-80	291.00
IUUC-Stu-112594	Solanum tuberosum	49.28	4.00e-78	284.00
IUUC-Tca-120919	Theobroma cacao	52.23	3.00e-99	354.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence