iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005468

UUCD1 version

UUC-ArL-01287

Ensembl Protein ID

Al_scaffold_0005_1600

UniProt Accession

D7LRG9; D7LRG9_ARALL

Genbank Protein ID

EFH53843.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_665565

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0005_1600	Al_scaffold_0005_1600	Al_scaffold_0005_1600

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	7.90e-27	95.0	1303	1634

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw....kskkkavsprellkalkke 80
           tGl+N      C++N ++Q+L+n++ +r  +l++ +++ ++      + ++++sl ++f++l     +++++ v+p++l  al+++
   Q: 1303 TGLQNEvgEYNCFLNVIIQSLWNLELFRAEFLQSSTREHHHV----GDPCVVCSLYEIFAALSaassETQNEPVAPSSLRIALSNL 1384
           57888733347**********************555555544....56788899999998887777799999*******9999999 PP
   S: 81   aee...fsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs 163
            +    f++ + +Da+E+la+++d l++++   +++++++  ++d    s+   + +    +++ + lF++ + +q+ c +c+ +s
   Q: 1385 YPDssfFQEAQMNDASEVLAVIFDCLHRSF--AQSSSVSDVDSSD----SNCTGSWDCANRTCIAHSLFGMDIFEQLNCYSCGLES 1464
           887556889*********************..3444444444444....3344555778888*********************998 PP
   S: 164  sreepfldlslpvpgkeetkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeq 243
            r+ + +++  +++ +  + ++      s++++L+    +++l ++   ++  c k+      + l++ P+v++  L + +  e  
   Q: 1465 -RHMKYTSFFHNINASALRTMKvtctenSFDELLNLVEMNHQLACDS--ETGGCGKLN--HIHHILTTPPHVFTTVLGWQNTCE-- 1543
           .7778899999999666554445556669999999999999999865..677777666..45678999***********95444.. PP
   S: 244  ksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtev.keeevleetg 327
            ++    +   ++ e+d+s +        + k +Y+L++vv+++G     HY++++ +++++ W+ +dD++V+++ ++++vl++++
   Q: 1544 TVEDIAATLAALNTEIDISIMYRG----LDPKSTYSLVSVVCYYG----QHYHCFAHSREHDqWIMYDDKTVKVIgSWSDVLSMCE 1621
           677788888888889***954444....33489************....9******9965555************779*****999 PP
   S: 328  ...staYvlfYkr 337
               ++ vl+Y++
   Q: 1622 rghLQPQVLLYEK 1634
           8888899999987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGQKKKTSAR SKQSPSSAAV TTVAVTEVEP SEITACSFND GGFSGPDANV EPLDSAVVKL 60
ECEKALKSFG RGSYNKAIRL IKDSCSRHQD SALIHRVQGT ICVKVAAVYE DLATKHKHLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCAGA AGAAGAAAAC CTCCGCTCGT TCCAAACAAT CGCCGTCTTC TGCGGCGGTG 60
ACGACGGTGG CAGTGACAGA GGTGGAGCCG TCTGAGATTA CCGCTTGTAG CTTCAACGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR001394--Peptidase_C19_UCH
IPR011990--TPR-like_helical_dom
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

KEGG

aly:ARALYDRAFT_665565

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001414	Ailuropoda melanoleuca	32.78	1.00e-43	171.00
IUUC-Atr-002451	Amborella trichopoda	46.45	0.00e+00	814.00
IUUC-Aca-004351	Anolis carolinensis	32.23	3.00e-42	167.00
IUUC-Ath-006682	Arabidopsis thaliana	90.34	0.00e+00	2889.00
IUUC-Ame-011525	Astyanax mexicanus	33.90	2.00e-43	171.00
IUUC-Bta-013344	Bos taurus	32.78	2.00e-43	171.00
IUUC-Bdi-015058	Brachypodium distachyon	38.90	2.00e-166	580.00
IUUC-Bol-015670	Brassica oleracea	76.26	0.00e+00	728.00
IUUC-Cja-018724	Callithrix jacchus	32.78	1.00e-43	172.00
IUUC-Cfa-021222	Canis familiaris	32.78	1.00e-43	172.00
IUUC-Cpo-021795	Cavia porcellus	32.78	5.00e-44	172.00
IUUC-Csa-023262	Chlorocebus sabaeus	32.78	1.00e-43	171.00
IUUC-Cho-024422	Choloepus hoffmanni	31.77	4.00e-39	157.00
IUUC-Dre-028046	Danio rerio	33.05	3.00e-43	170.00
IUUC-Eca-033235	Equus caballus	32.51	3.00e-43	170.00
IUUC-Fca-036070	Felis catus	31.87	1.00e-43	172.00
IUUC-Fal-037089	Ficedula albicollis	32.49	3.00e-43	171.00
IUUC-Gga-041241	Gallus gallus	33.05	6.00e-44	173.00
IUUC-Gac-042157	Gasterosteus aculeatus	33.99	1.00e-45	177.00
IUUC-Ggo-045626	Gorilla gorilla	32.78	1.00e-43	171.00
IUUC-Hsa-045767	Homo sapiens	32.78	1.00e-43	172.00
IUUC-Itr-048187	Ictidomys tridecemlineatus	32.78	1.00e-43	172.00
IUUC-Lch-049712	Latimeria chalumnae	34.46	2.00e-43	169.00
IUUC-Lpe-051572	Leersia perrieri	38.39	0.00e+00	879.00
IUUC-Loc-052615	Lepisosteus oculatus	33.90	1.00e-42	168.00
IUUC-Laf-054578	Loxodonta africana	31.87	3.00e-43	171.00
IUUC-Mcc-054696	Macaca mulatta	32.78	1.00e-43	172.00
IUUC-Mtr-058682	Medicago truncatula	51.77	0.00e+00	1491.00
IUUC-Mmr-060701	Microcebus murinus	32.78	2.00e-43	171.00
IUUC-Mdo-062433	Monodelphis domestica	32.23	1.00e-41	165.00
IUUC-Mmu-063480	Mus musculus	32.78	3.00e-43	170.00
IUUC-Mpu-066404	Mustela putorius furo	32.78	9.00e-44	172.00
IUUC-Mlu-067841	Myotis lucifugus	32.78	1.00e-43	172.00
IUUC-Nle-070110	Nomascus leucogenys	32.78	7.00e-44	172.00
IUUC-Oan-073551	Ornithorhynchus anatinus	32.23	1.00e-42	168.00
IUUC-Ocu-074729	Oryctolagus cuniculus	32.78	8.00e-44	172.00
IUUC-Ola-086742	Oryzias latipes	32.79	3.00e-42	166.00
IUUC-Oga-088920	Otolemur garnettii	32.78	1.00e-43	172.00
IUUC-Oar-089644	Ovis aries	32.78	1.00e-43	171.00
IUUC-Ptr-091530	Pan troglodytes	32.78	7.00e-44	172.00
IUUC-Pan-092190	Papio anubis	32.78	1.00e-43	172.00
IUUC-Psi-094022	Pelodiscus sinensis	32.69	1.00e-42	169.00
IUUC-Pma-094745	Petromyzon marinus	29.95	5.00e-35	140.00
IUUC-Pfo-096072	Poecilia formosa	32.77	4.00e-41	163.00
IUUC-Pab-097979	Pongo abelii	32.78	8.00e-44	172.00
IUUC-Pop-099539	Populus trichocarpa	55.33	0.00e+00	1618.00
IUUC-Pca-101005	Procavia capensis	31.62	4.00e-26	114.00
IUUC-Pva-103125	Pteropus vampyrus	32.51	3.00e-43	170.00
IUUC-Rno-105463	Rattus norvegicus	32.23	3.00e-42	167.00
IUUC-Sha-107164	Sarcophilus harrisii	32.51	1.00e-42	169.00
IUUC-Sit-110021	Setaria italica	39.29	1.00e-154	540.00
IUUC-Sly-111258	Solanum lycopersicum	54.59	0.00e+00	1620.00
IUUC-Stu-112904	Solanum tuberosum	55.68	0.00e+00	1568.00
IUUC-Sbi-114345	Sorghum bicolor	41.34	3.00e-175	609.00
IUUC-Tgu-116521	Taeniopygia guttata	32.49	8.00e-44	171.00
IUUC-Tni-120582	Tetraodon nigroviridis	33.63	5.00e-40	157.00
IUUC-Tca-121692	Theobroma cacao	60.20	0.00e+00	1801.00
IUUC-Vpa-130213	Vicugna pacos	32.78	2.00e-43	171.00
IUUC-Xtr-131831	Xenopus tropicalis	33.52	2.00e-44	174.00
IUUC-Xma-133409	Xiphophorus maculatus	33.24	6.00e-43	169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence