iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099128

Ensembl Protein ID

POPTR_0016s04170.1

UniProt Accession

B9IHW1; B9IHW1_POPTR

Genbank Protein ID

EEF05028.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_734858; POPTR_0016s04170g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s04170	POPTR_0016s04170.1	POPTR_0016s04170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-12	48.2	292	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclafsdtllvsGsdDgtikvWDl 30
           + + +  ++l+++s D+t ++W++
   Q: 292  CTITW-HNHLATASADHTARLWNT 314
           45889.47**************95 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAAEHENPNS SNLPAESSAF VTDDELMIDN TSPIPLAIPP SIPAVPPNAL ILTVPPRPLV 60
PFPIRPPGVQ SGEMRTSDSD SDQNQLRPTR TILVSTGGYE VSEAIQRTQE KAMQELMMKW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCTG AACATGAAAA CCCCAATTCA TCGAATTTAC CAGCAGAATC TTCTGCTTTT 60
GTCACTGATG ATGAACTGAT GATTGATAAT ACTAGTCCTA TTCCACTAGC AATCCCACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

pop:POPTR_0016s04170g

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence