iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006382

UUCD1 version

UUC-ArL-00940

Ensembl Protein ID

fgenesh1_pg.C_scaffold_3001067

UniProt Accession

D7LAS1; D7LAS1_ARALL

Genbank Protein ID

EFH61127.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348715

Gene Name

PUB24; ARALYDRAFT_341304

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_3001067	fgenesh1_pg.C_scaffold_3001067	fgenesh1_pg.C_scaffold_3001067

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-31	108.4	9	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           e+p +f+CpIsle+M+dPv++ sGitydr+sI kwl++  + cPvt+qpl  ++dl+Pn+ lrrliq+wc en+
   Q: 9    EIPNYFICPISLEIMKDPVTTVSGITYDRQSIVKWLEKVPS-CPVTKQPLpLDSDLTPNHMLRRLIQHWCVENE 81
           69**************************************9.********889999***************997 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDHEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQSI VKWLEKVPSC PVTKQPLPLD 60
SDLTPNHMLR RLIQHWCVEN ETRGVVRIST PRAPPGKLNV VEEIKNLKGF GQEALGREET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCATG AAGAGGAAGA GATCGAGATT CCTAATTACT TTATTTGCCC AATCTCACTT 60
GAGATCATGA AAGATCCAGT CACGACCGTT TCTGGCATCA CTTACGACCG TCAAAGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_341304

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007017	Arabidopsis thaliana	92.29	0.00e+00	833.00
IUUC-Bol-016395	Brassica oleracea	80.73	0.00e+00	732.00
IUUC-Bra-017316	Brassica rapa	79.01	0.00e+00	670.00
IUUC-Mtr-057873	Medicago truncatula	43.12	8.00e-99	353.00
IUUC-Pop-099498	Populus trichocarpa	46.35	3.00e-104	370.00
IUUC-Ppe-101540	Prunus persica	43.12	7.00e-103	366.00
IUUC-Tca-121295	Theobroma cacao	47.43	6.00e-108	383.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence